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Equivalence class NR_all_60443.3 Current

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
18FVY|1|2 (rep)Small subunit ribosomal RNA18S rRNAGiardia intestinalis assemblage AEukaryaRF0196040S subunit of the Giardia lamblia 80S ribosomeElectron microscopy2.942024-01-24
27PWO|1|2Small subunit ribosomal RNArRNA 18SGiardia lamblia ATCC 50803EukaryaRF01960Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolutionElectron microscopy2.752022-04-20
38G4S|1|2Small subunit ribosomal RNA18S rRNAGiardia intestinalis assemblage AEukaryaRF0196040S ribosomal subunit of the 80S Giardia intestinalis assemblage A ribosome with Emetine bound in V2 conformation with mRNA and three tRNAs.Electron microscopy3.142024-01-31
47PWF|1|2Small subunit ribosomal RNArRNA 18SGiardia lamblia ATCC 50803EukaryaRF01960Cryo-EM structure of small subunit of Giardia lamblia ribosome at 2.9 A resolutionElectron microscopy2.852022-05-25
58BTR|1|StSmall subunit ribosomal RNASmall Subunit rRNAGiardia lamblia ATCC 50803EukaryaRF01960Giardia Ribosome in PRE-T Hybrid State (D2)Electron microscopy3.252023-03-22
68BRM|1|StSmall subunit ribosomal RNASmall Subunit rRNAGiardia lamblia ATCC 50803EukaryaRF01960Giardia ribosome in POST-T state, no E-site tRNA (A6)Electron microscopy3.332023-03-15
78BR8|1|StSmall subunit ribosomal RNASmall Subunit rRNAGiardia lamblia ATCC 50803EukaryaRF01960Giardia ribosome in POST-T state (A1)Electron microscopy3.352023-03-15
88BSI|1|StSmall subunit ribosomal RNASmall Subunit rRNAGiardia intestinalisEukaryaRF01960Giardia ribosome chimeric hybrid-like GDP+Pi bound state (B1)Electron microscopy3.42023-03-15
98BTD|1|StSmall subunit ribosomal RNASmall Subunit rRNAGiardia lamblia ATCC 50803EukaryaRF01960Giardia Ribosome in PRE-T Hybrid State (D1)Electron microscopy4.92023-03-22
108BSJ|1|StSmall subunit ribosomal RNASmall Subunit rRNA, mRNAGiardia intestinalisEukaryaRF01960Giardia Ribosome in PRE-T Classical State (C)Electron microscopy6.492023-03-22

Release history

Release3.3203.3213.3223.3233.3243.3253.3263.3273.3283.3293.3303.3313.3323.3333.3343.335
Date2024-01-312024-02-072024-02-142024-02-212024-02-282024-03-062024-03-132024-03-202024-03-272024-04-032024-04-102024-04-172024-04-242024-05-012024-05-082024-05-15

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
17PWO|1|2Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolutionELECTRON MICROSCOPY2.751340
27PWF|1|2Cryo-EM structure of small subunit of Giardia lamblia ribosome at 2.9 A resolutionELECTRON MICROSCOPY2.851340
38G4S|1|240S ribosomal subunit of the 80S Giardia intestinalis assemblage A ribosome with Emetine bound in V2 conformation with mRNA and three tRNAs.ELECTRON MICROSCOPY3.141441
48FVY|1|240S subunit of the Giardia lamblia 80S ribosomeELECTRON MICROSCOPY2.941441
58BRM|1|StGiardia ribosome in POST-T state, no E-site tRNA (A6)ELECTRON MICROSCOPY3.331454
68BR8|1|StGiardia ribosome in POST-T state (A1)ELECTRON MICROSCOPY3.351454
78BSJ|1|StGiardia Ribosome in PRE-T Classical State (C)ELECTRON MICROSCOPY6.491454
88BTR|1|StGiardia Ribosome in PRE-T Hybrid State (D2)ELECTRON MICROSCOPY3.251454
98BTD|1|StGiardia Ribosome in PRE-T Hybrid State (D1)ELECTRON MICROSCOPY4.91454
108BSI|1|StGiardia ribosome chimeric hybrid-like GDP+Pi bound state (B1)ELECTRON MICROSCOPY3.41454
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