Equivalence class NR_all_62041.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2JYH|1|B (rep) | RNA (43-MER) | Rigid-body refinement of the tetraloop-receptor RNA complex | Solution NMR | 2008-10-07 | |||||
| 2 | 2JYH|1|A | RNA (43-MER) | Rigid-body refinement of the tetraloop-receptor RNA complex | Solution NMR | 2008-10-07 | |||||
| 3 | 2ADT|1|A | 43-MER | NMR structure of a 30 kDa GAAA tetraloop-receptor complex. | Solution NMR | 2005-07-26 | |||||
| 4 | 2I7E|1|A | 43-MER | GAAA tetralooop receptor complex with associated cobalt hexammine. | Solution NMR | 2007-04-03 | |||||
| 5 | 2I7Z|1|A | 43-MER | GAAA tetraloop receptor complex with associated manganese ions. | Solution NMR | 2007-04-03 | |||||
| 6 | 2ADT|1|B | 43-MER | NMR structure of a 30 kDa GAAA tetraloop-receptor complex. | Solution NMR | 2005-07-26 | |||||
| 7 | 2I7E|1|B | 43-MER | GAAA tetralooop receptor complex with associated cobalt hexammine. | Solution NMR | 2007-04-03 | |||||
| 8 | 2I7Z|1|B | 43-MER | GAAA tetraloop receptor complex with associated manganese ions. | Solution NMR | 2007-04-03 | |||||
| 9 | 2JYJ|2|A | RNA (43-MER) | Re-refining the tetraloop-receptor RNA-RNA complex using NMR-derived restraints and Xplor-nih (2.18) | Solution NMR | 2008-10-07 | |||||
| 10 | 2JYF|3|A | RNA (43-MER) | Tetraloop-receptor RNA complex | Solution NMR | 2008-10-07 | |||||
| 11 | 2JYJ|2|B | RNA (43-MER) | Re-refining the tetraloop-receptor RNA-RNA complex using NMR-derived restraints and Xplor-nih (2.18) | Solution NMR | 2008-10-07 | |||||
| 12 | 2JYF|3|B | RNA (43-MER) | Tetraloop-receptor RNA complex | Solution NMR | 2008-10-07 |
Release history
| Release | 2.0 | 2.1 | 2.2 | 2.3 | 2.4 | 2.5 | 2.6 | 2.7 | 2.8 | 2.9 | 2.10 | 2.11 | 2.12 | 2.13 | 2.14 | 2.15 | 2.16 | 2.17 | 2.18 | 2.19 | 2.20 | 2.21 | 2.22 | 2.23 | 2.24 | 2.25 | 2.26 | 2.27 | 2.28 | 2.29 | 2.30 | 2.31 | 2.32 | 2.33 | 2.34 | 2.35 | 2.36 | 2.37 | 2.38 | 2.39 | 2.40 | 2.41 | 2.42 | 2.43 | 2.44 | 2.45 | 2.46 | 2.47 | 2.48 | 2.49 | 2.50 | 2.51 | 2.52 | 2.53 | 2.54 | 2.55 | 2.56 | 2.57 | 2.58 | 2.59 | 2.60 | 2.61 | 2.62 | 2.63 | 2.64 | 2.65 | 2.66 | 2.67 | 2.68 | 2.69 | 2.70 | 2.71 | 2.72 | 2.73 | 2.74 | 2.75 | 2.76 | 2.77 | 2.78 | 2.79 | 2.80 | 2.81 | 2.82 | 2.83 | 2.84 | 2.85 | 2.86 | 2.87 | 2.88 | 2.89 | 2.90 | 2.91 | 2.92 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2014-12-05 | 2014-12-12 | 2014-12-19 | 2014-12-26 | 2015-01-02 | 2015-01-09 | 2015-01-16 | 2015-01-23 | 2015-01-30 | 2015-02-06 | 2015-02-13 | 2015-02-20 | 2015-02-27 | 2015-03-06 | 2015-03-13 | 2015-03-20 | 2015-03-27 | 2015-04-03 | 2015-04-10 | 2015-04-17 | 2015-04-24 | 2015-05-01 | 2015-05-08 | 2015-05-15 | 2015-05-22 | 2015-05-29 | 2015-06-05 | 2015-06-12 | 2015-06-19 | 2015-06-26 | 2015-07-03 | 2015-07-10 | 2015-07-17 | 2015-07-24 | 2015-07-31 | 2015-08-07 | 2015-08-14 | 2015-08-21 | 2015-08-28 | 2015-09-04 | 2015-09-11 | 2015-09-18 | 2015-09-25 | 2015-10-02 | 2015-10-09 | 2015-10-16 | 2015-10-23 | 2015-10-30 | 2015-11-06 | 2015-11-13 | 2015-11-20 | 2015-11-27 | 2015-12-04 | 2015-12-11 | 2015-12-18 | 2015-12-25 | 2016-01-01 | 2016-01-08 | 2016-01-15 | 2016-01-22 | 2016-01-29 | 2016-02-05 | 2016-02-12 | 2016-02-19 | 2016-02-26 | 2016-03-04 | 2016-03-11 | 2016-03-18 | 2016-03-25 | 2016-04-01 | 2016-04-08 | 2016-04-15 | 2016-04-22 | 2016-04-29 | 2016-05-06 | 2016-05-13 | 2016-05-20 | 2016-05-27 | 2016-06-03 | 2016-06-10 | 2016-06-17 | 2016-06-24 | 2016-07-01 | 2016-07-08 | 2016-07-15 | 2016-07-22 | 2016-07-29 | 2016-08-05 | 2016-08-12 | 2016-08-19 | 2016-08-26 | 2016-09-02 | 2016-09-09 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_62041.1 | NR_all_06706.1 | 2.93 | (4) 2JYH|1|A, 2JYJ|2|A, 2JYH|1|B, 2JYJ|2|B | (8) 2I7E|1|A, 2I7E|1|B, 2I7Z|1|A, 2I7Z|1|B, 2JYF|3|A, 2JYF|3|B, 2ADT|1|A, 2ADT|1|B | (0) |
| NR_all_62041.1 | NR_all_37036.1 | 2.93 | (2) 2JYF|3|A, 2JYF|3|B | (10) 2I7E|1|A, 2JYJ|2|A, 2ADT|1|B, 2I7Z|1|A, 2I7E|1|B, 2JYH|1|A, 2I7Z|1|B, 2JYH|1|B, 2ADT|1|A, 2JYJ|2|B | (0) |
| NR_all_62041.1 | NR_all_50005.1 | 2.93 | (6) 2I7E|1|A, 2I7Z|1|B, 2ADT|1|B, 2I7E|1|B, 2ADT|1|A, 2I7Z|1|A | (6) 2JYH|1|A, 2JYF|3|A, 2JYF|3|B, 2JYJ|2|B, 2JYJ|2|A, 2JYH|1|B | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 2I7E|1|B | GAAA tetralooop receptor complex with associated cobalt hexammine. | SOLUTION NMR | 43 | |
| 2 | 2ADT|1|B | NMR structure of a 30 kDa GAAA tetraloop-receptor complex. | SOLUTION NMR | 43 | |
| 3 | 2ADT|1|A | NMR structure of a 30 kDa GAAA tetraloop-receptor complex. | SOLUTION NMR | 43 | |
| 4 | 2I7E|1|A | GAAA tetralooop receptor complex with associated cobalt hexammine. | SOLUTION NMR | 43 | |
| 5 | 2I7Z|1|A | GAAA tetraloop receptor complex with associated manganese ions. | SOLUTION NMR | 43 | |
| 6 | 2I7Z|1|B | GAAA tetraloop receptor complex with associated manganese ions. | SOLUTION NMR | 43 | |
| 7 | 2JYJ|2|A | Re-refining the tetraloop-receptor RNA-RNA complex using NMR-derived restraints and Xplor-nih (2.18) | SOLUTION NMR | 43 | |
| 8 | 2JYJ|2|B | Re-refining the tetraloop-receptor RNA-RNA complex using NMR-derived restraints and Xplor-nih (2.18) | SOLUTION NMR | 43 | |
| 9 | 2JYH|1|A | Rigid-body refinement of the tetraloop-receptor RNA complex | SOLUTION NMR | 43 | |
| 10 | 2JYH|1|B | Rigid-body refinement of the tetraloop-receptor RNA complex | SOLUTION NMR | 43 | |
| 11 | 2JYF|3|B | Tetraloop-receptor RNA complex | SOLUTION NMR | 43 | |
| 12 | 2JYF|3|A | Tetraloop-receptor RNA complex | SOLUTION NMR | 43 |
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