#IFECompound(s)RNA source organismTitleMethodResolutionDate
11NYI|1|B+ 1NYI|1|A (rep)5'-R(P*GP*UP*GP*GP*UP*CP*UP*GP*AP*UP*GP*AP*GP*GP*CP*C)-3', 5'-R(*GP*CP*CP*GP*AP*AP*AP*CP*UP*CP*GP*UP*AP*AP*GP*AP*GP*UP*CP*AP*CP*CP*AP*C)-3'Crosslinked Hammerhead Ribozyme Initial StateX-RAY DIFFRACTION2.852004-02-24
21Q29|1|B+ 1Q29|1|A5'-R(*GP*GP*UP*GP*GP*UP*CP*UP*GP*AP*UP*GP*AP*GP*GP*CP*C)-3', RibozymeHammerhead Ribozyme with 5'-5' G-G linkage: Conformational change experimentX-RAY DIFFRACTION32004-02-24
31MME|1|B+ 1MME|1|ARNA HAMMERHEAD RIBOZYMETHE CRYSTAL STRUCTURE OF AN ALL-RNA HAMMERHEAD RIBOZYME: A PROPOSED MECHANISM FOR RNA CATALYTIC CLEAVAGEX-RAY DIFFRACTION3.11996-02-06
4299D|1|B+ 299D|1|ARNA HAMMERHEAD RIBOZYMECAPTURING THE STRUCTURE OF A CATALYTIC RNA INTERMEDIATE: THE HAMMERHEAD RIBOZYMEX-RAY DIFFRACTION31997-01-24
5301D|1|B+ 301D|1|ARNA HAMMERHEAD RIBOZYMECAPTURING THE STRUCTURE OF A CATALYTIC RNA INTERMEDIATE: RNA HAMMERHEAD RIBOZYME, MG(II)-SOAKEDX-RAY DIFFRACTION31997-01-24
6359D|1|B+ 359D|1|ARNA HAMMERHEAD RIBOZYMEINHIBITION OF THE HAMMERHEAD RIBOZYME CLEAVAGE REACTION BY SITE-SPECIFIC BINDING OF TB(III)X-RAY DIFFRACTION2.91997-11-07
7300D|1|B+ 300D|1|ARNA HAMMERHEAD RIBOZYMECAPTURING THE STRUCTURE OF A CATALYTIC RNA INTERMEDIATE: RNA HAMMERHEAD RIBOZYME, MN(II)-SOAKEDX-RAY DIFFRACTION31997-01-24
81MME|1|D+ 1MME|1|CRNA HAMMERHEAD RIBOZYMETHE CRYSTAL STRUCTURE OF AN ALL-RNA HAMMERHEAD RIBOZYME: A PROPOSED MECHANISM FOR RNA CATALYTIC CLEAVAGEX-RAY DIFFRACTION3.11996-02-06
9488D|1|D+ 488D|1|B+ 488D|1|A+ 488D|1|CRNA RIBOZYME STRAND, FIRST RNA FRAGMENT OF CLEAVED SUBSTRATE, SECOND RNA FRAGMENT OF CLEAVED SUBSTRATE, UNCLEAVED RNA SUBSTRATECATALYTIC RNA ENZYME-PRODUCT COMPLEXX-RAY DIFFRACTION3.12000-03-06
10379D|1|B+ 379D|1|ARNA (5'-R(*GP*UP*GP*GP*UP*CP*UP*GP*AP*UP*GP*AP*GP*GP*CP*C)-3'), RNA (5'-R(*GP*GP*CP*CP*GP*AP*AP*AP*CP*UP*CP*GP*UP*AP*AP*GP*A P*GP*UP*CP*AP*CP*CP*AP*C)-3')THE STRUCTURAL BASIS OF HAMMERHEAD RIBOZYME SELF-CLEAVAGEX-RAY DIFFRACTION3.11998-02-11

Release history

Release2.932.942.952.962.972.982.992.1002.1012.1022.1032.1042.1052.1062.1072.1082.1092.1102.1112.1122.1132.1142.1152.1162.1172.1182.1192.1202.1212.1222.1232.1242.1252.1262.1272.1282.1292.1302.1312.1322.1332.1342.1352.1362.1372.1382.1392.1402.1412.1422.1432.1442.1452.1462.1472.1482.1492.1502.1512.1522.1532.1542.1552.1562.1572.1583.03.13.23.33.43.53.63.73.83.93.103.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.793.803.813.823.833.843.853.863.873.88
Date2016-09-162016-09-232016-09-302016-10-072016-10-142016-10-212016-10-282016-11-042016-11-112016-11-182016-11-252016-12-022016-12-092016-12-162016-12-232016-12-302017-01-062017-01-132017-01-202017-01-272017-02-032017-02-102017-02-172017-02-242017-03-032017-03-102017-03-172017-03-242017-03-312017-04-112017-04-152017-04-262017-04-292017-05-092017-05-152017-05-202017-05-272017-06-072017-06-112017-06-212017-06-242017-06-282017-07-042017-07-102017-07-152017-07-262017-07-312017-08-052017-08-122017-08-192017-08-262017-09-032017-09-092017-09-162017-09-232017-09-302017-10-072017-10-142017-10-212017-10-282017-11-032017-11-102017-11-172017-11-242017-12-012017-12-082017-12-152017-12-222017-12-292018-01-052018-01-122018-01-192018-01-262018-02-022018-02-092018-02-162018-02-232018-03-012018-03-082018-03-152018-03-222018-03-292018-04-062018-04-132018-04-202018-04-272018-05-042018-05-112018-05-182018-05-252018-06-012018-06-082018-06-152018-06-222018-06-292018-07-062018-07-132018-07-202018-07-272018-08-032018-08-102018-08-172018-08-242018-08-312018-09-072018-09-142018-09-212018-09-282018-10-052018-10-122018-10-192018-10-262018-11-022018-11-092018-11-162018-11-232018-11-302018-12-072018-12-142018-12-212018-12-282019-01-042019-01-112019-01-182019-01-252019-02-012019-02-082019-02-152019-02-222019-03-012019-03-082019-03-152019-03-222019-03-292019-04-052019-04-122019-04-192019-04-262019-05-032019-05-102019-05-172019-05-242019-05-312019-06-072019-06-142019-06-212019-06-282019-07-052019-07-122019-07-192019-07-262019-08-022019-08-092019-08-162019-08-23

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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
11Q29|1|B+1Q29|1|AHammerhead Ribozyme with 5'-5' G-G linkage: Conformational change experimentX-RAY DIFFRACTION324
2379D|1|B+379D|1|ATHE STRUCTURAL BASIS OF HAMMERHEAD RIBOZYME SELF-CLEAVAGEX-RAY DIFFRACTION3.125
3488D|1|D+488D|1|B+488D|1|A+488D|1|CCATALYTIC RNA ENZYME-PRODUCT COMPLEXX-RAY DIFFRACTION3.125
4359D|1|B+359D|1|AINHIBITION OF THE HAMMERHEAD RIBOZYME CLEAVAGE REACTION BY SITE-SPECIFIC BINDING OF TB(III)X-RAY DIFFRACTION2.925
5299D|1|B+299D|1|ACAPTURING THE STRUCTURE OF A CATALYTIC RNA INTERMEDIATE: THE HAMMERHEAD RIBOZYMEX-RAY DIFFRACTION325
6300D|1|B+300D|1|ACAPTURING THE STRUCTURE OF A CATALYTIC RNA INTERMEDIATE: RNA HAMMERHEAD RIBOZYME, MN(II)-SOAKEDX-RAY DIFFRACTION325
71NYI|1|B+1NYI|1|ACrosslinked Hammerhead Ribozyme Initial StateX-RAY DIFFRACTION2.8524
81MME|1|D+1MME|1|CTHE CRYSTAL STRUCTURE OF AN ALL-RNA HAMMERHEAD RIBOZYME: A PROPOSED MECHANISM FOR RNA CATALYTIC CLEAVAGEX-RAY DIFFRACTION3.125
91MME|1|B+1MME|1|ATHE CRYSTAL STRUCTURE OF AN ALL-RNA HAMMERHEAD RIBOZYME: A PROPOSED MECHANISM FOR RNA CATALYTIC CLEAVAGEX-RAY DIFFRACTION3.125
10301D|1|B+301D|1|ACAPTURING THE STRUCTURE OF A CATALYTIC RNA INTERMEDIATE: RNA HAMMERHEAD RIBOZYME, MG(II)-SOAKEDX-RAY DIFFRACTION325