Equivalence class NR_all_67629.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7PWO|1|3 (rep) | 5S ribosomal RNA | rRNA 5S | Giardia lamblia ATCC 50803 | Eukarya | RF00001 | Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution | Electron microscopy | 2.75 | 2022-04-20 |
| 2 | 7PWG|1|3 | 5S ribosomal RNA | rRNA 5S | Giardia lamblia ATCC 50803 | Eukarya | RF00001 | Cryo-EM structure of large subunit of Giardia lamblia ribosome at 2.7 A resolution | Electron microscopy | 2.75 | 2022-04-20 |
| 3 | 8BTR|1|LE | 5S ribosomal RNA | 5S rRNA | Giardia lamblia ATCC 50803 | Eukarya | RF00001 | Giardia Ribosome in PRE-T Hybrid State (D2) | Electron microscopy | 3.25 | 2023-03-22 |
| 4 | 8BRM|1|LE | 5S ribosomal RNA | 5S rRNA | Giardia lamblia ATCC 50803 | Eukarya | RF00001 | Giardia ribosome in POST-T state, no E-site tRNA (A6) | Electron microscopy | 3.33 | 2023-03-15 |
| 5 | 8BR8|1|LE | 5S ribosomal RNA | 5S rRNA | Giardia lamblia ATCC 50803 | Eukarya | RF00001 | Giardia ribosome in POST-T state (A1) | Electron microscopy | 3.35 | 2023-03-15 |
| 6 | 8BSI|1|LE | 5S ribosomal RNA | 5S rRNA | Giardia intestinalis | Eukarya | RF00001 | Giardia ribosome chimeric hybrid-like GDP+Pi bound state (B1) | Electron microscopy | 3.4 | 2023-03-15 |
| 7 | 8BTD|1|LE | 5S ribosomal RNA | 5S rRNA | Giardia lamblia ATCC 50803 | Eukarya | RF00001 | Giardia Ribosome in PRE-T Hybrid State (D1) | Electron microscopy | 4.9 | 2023-03-22 |
| 8 | 8BSJ|1|LE | 5S ribosomal RNA | 5S rRNA | Giardia intestinalis | Eukarya | RF00001 | Giardia Ribosome in PRE-T Classical State (C) | Electron microscopy | 6.49 | 2023-03-22 |
Release history
| Release | 3.275 | 3.276 | 3.277 | 3.278 | 3.279 | 3.280 | 3.281 | 3.282 | 3.283 | 3.284 | 3.285 | 3.286 | 3.287 | 3.288 | 3.289 | 3.290 | 3.291 | 3.292 | 3.293 | 3.294 | 3.295 | 3.296 | 3.297 | 3.298 | 3.299 | 3.300 | 3.301 | 3.302 | 3.303 | 3.304 | 3.305 | 3.306 | 3.307 | 3.308 | 3.309 | 3.310 | 3.311 | 3.312 | 3.313 | 3.314 | 3.315 | 3.316 | 3.317 | 3.318 | 3.319 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2023-03-22 | 2023-03-29 | 2023-04-05 | 2023-04-12 | 2023-04-19 | 2023-04-26 | 2023-05-03 | 2023-05-10 | 2023-05-17 | 2023-05-24 | 2023-05-31 | 2023-06-07 | 2023-06-14 | 2023-06-21 | 2023-06-28 | 2023-07-05 | 2023-07-12 | 2023-07-19 | 2023-07-26 | 2023-08-02 | 2023-08-09 | 2023-08-16 | 2023-08-23 | 2023-08-30 | 2023-09-06 | 2023-09-13 | 2023-09-20 | 2023-09-27 | 2023-10-04 | 2023-10-11 | 2023-10-18 | 2023-10-25 | 2023-11-01 | 2023-11-08 | 2023-11-15 | 2023-11-24 | 2023-11-29 | 2023-12-06 | 2023-12-13 | 2023-12-20 | 2023-12-27 | 2024-01-03 | 2024-01-10 | 2024-01-17 | 2024-01-24 |
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|---|
| 1 | 8BTD|1|LE | Giardia Ribosome in PRE-T Hybrid State (D1) | ELECTRON MICROSCOPY | 4.9 | 117 | |
| 2 | 8BTR|1|LE | Giardia Ribosome in PRE-T Hybrid State (D2) | ELECTRON MICROSCOPY | 3.25 | 117 | |
| 3 | 8BSI|1|LE | Giardia ribosome chimeric hybrid-like GDP+Pi bound state (B1) | ELECTRON MICROSCOPY | 3.4 | 115 | |
| 4 | 8BSJ|1|LE | Giardia Ribosome in PRE-T Classical State (C) | ELECTRON MICROSCOPY | 6.49 | 116 | |
| 5 | 8BR8|1|LE | Giardia ribosome in POST-T state (A1) | ELECTRON MICROSCOPY | 3.35 | 117 | |
| 6 | 8BRM|1|LE | Giardia ribosome in POST-T state, no E-site tRNA (A6) | ELECTRON MICROSCOPY | 3.33 | 117 | |
| 7 | 7PWG|1|3 | Cryo-EM structure of large subunit of Giardia lamblia ribosome at 2.7 A resolution | ELECTRON MICROSCOPY | 2.75 | 117 | |
| 8 | 7PWO|1|3 | Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution | ELECTRON MICROSCOPY | 2.75 | 117 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: