#IFECompound(s)RNA source organismTitleMethodResolutionDate
15Z1I|1|A (rep)RNA (5'-R(P*GP*CP*GP*UP*CP*GP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')synthetic constructCrystal structure of the protozoal cytoplasmic ribosomal decoding site in complex with 6'-fluoro sisomicinX-RAY DIFFRACTION1.92018-05-30
22PWT|1|A+ 2PWT|1|B22-mer of the ribosomal decoding siteCrystal structure of the bacterial ribosomal decoding site complexed with aminoglycoside containing the L-HABA groupX-RAY DIFFRACTION1.82007-09-18
35ZEG|1|A+ 5ZEG|1|B+ 5ZEG|1|CRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*(1MA)P*CP*GP*UP*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial A1408me1A-mutant ribosomal decoding siteX-RAY DIFFRACTION2.42018-03-21
45BWS|1|A+ 5BWS|1|BRNA (5'-D(*UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (axial 4'-F)X-RAY DIFFRACTION2.62016-06-22
53TD1|1|B+ 3TD1|1|ARNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*CP*GP*(5BU)P*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial A1408G-mutant and the protozoa cytoplasmic ribosomal decoding site in complex with geneticinX-RAY DIFFRACTION2.12011-12-07
64K32|1|A+ 4K32|1|BRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*UP*UP*CP*CP*GP*GP*AP*AP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of geneticin bound to the leishmanial rRNA A-siteX-RAY DIFFRACTION2.52013-07-31
75BWS|1|C+ 5BWS|1|DRNA (5'-D(*UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (axial 4'-F)X-RAY DIFFRACTION2.62016-06-22
85ZEI|1|A+ 5ZEI|1|BRNA (5'-R(P*UP*GP*CP*GP*UP*CP*(1MA)P*CP*GP*UP*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3'), RNA (5'-R(P*GP*CP*GP*UP*CP*(1MA)P*CP*GP*UP*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial A1408me1A-mutant ribosomal decoding site in complex with geneticinX-RAY DIFFRACTION2.12018-03-21
93BNL|1|A+ 3BNL|1|BA site of bacterial ribosomeCrystal structure of the bacterial ribosomal decoding A site in the presence of [Co(NH3)6]Cl3X-RAY DIFFRACTION2.62008-06-24
105XZ1|1|C+ 5XZ1|1|DRNA (5'-R(*UP*GP*CP*GP*UP*CP*GP*CP*UP*CP*CP*GP*GP*AP*AP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the Homo Sapiens cytoplasmic ribosomal decoding site in complex with G418X-RAY DIFFRACTION3.012018-07-18
114P3S|1|B+ 4P3S|1|A5'-R(*UP*UP*GP*CP*GP*UP*CP*CP*CP*GP*(5BU)P*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3'Crystal structure of the bacterial A1408C-mutant ribosomal decoding site in complex with geneticinX-RAY DIFFRACTION2.32016-05-04
125XZ1|1|A+ 5XZ1|1|BRNA (5'-R(*UP*GP*CP*GP*UP*CP*GP*CP*UP*CP*CP*GP*GP*AP*AP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the Homo Sapiens cytoplasmic ribosomal decoding site in complex with G418X-RAY DIFFRACTION3.012018-07-18
132ET5|1|A+ 2ET5|1|B5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Complex Between Ribostamycin and the 16S-RRNA A-SiteX-RAY DIFFRACTION2.22005-12-13
144PDQ|1|A+ 4PDQ|1|BRNA (5'-*UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C-3')Crystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neomycin analogX-RAY DIFFRACTION32015-01-07
154GPY|1|A+ 4GPY|1|BRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial ribosomal decoding site in complex with 6'-hydroxysisomicinX-RAY DIFFRACTION2.82013-04-03
164WCP|1|A+ 4WCP|1|B+ 4WCP|1|CRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*(1MA)P*CP*GP*UP*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial A1408me1A-mutant ribosomal decoding siteX-RAY DIFFRACTION2.42015-09-09
175BXK|1|C+ 5BXK|1|DRNA (5'-D(P*UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (equatorial 4'-F)X-RAY DIFFRACTION3.12016-06-22
184GPW|1|A+ 4GPW|1|BRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the protozoal cytoplasmic ribosomal decoding site in complex with 6'-hydroxysisomicin (P21212 form)X-RAY DIFFRACTION32013-04-03
191MWL|1|A+ 1MWL|1|B5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Crystal structure of geneticin bound to the eubacterial 16S rRNA A siteX-RAY DIFFRACTION2.42003-02-18
202ET4|1|A+ 2ET4|1|B5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Complex Between Neomycin B and the 16S-RRNA A-SiteX-RAY DIFFRACTION2.42005-12-13
214GPX|1|A+ 4GPX|1|BRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the protozoal cytoplasmic ribosomal decoding site in complex with 6'-hydroxysisomicin (P212121 form)X-RAY DIFFRACTION2.62013-04-03
225BXK|1|A+ 5BXK|1|BRNA (5'-D(P*UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (equatorial 4'-F)X-RAY DIFFRACTION3.12016-06-22
232ESJ|1|A+ 2ESJ|1|B5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Complex between Lividomycin A and the 16S-Rrna A SiteX-RAY DIFFRACTION2.22005-12-20
245Z1H|1|B+ 5Z1H|1|ARNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial ribosomal decoding site in complex with 6'-fluoro sisomicinX-RAY DIFFRACTION2.42018-05-30
252ESI|1|A+ 2ESI|1|B5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Complex between Kanamycin A and the 16S-Rrna A Site.X-RAY DIFFRACTION32005-12-20
264WCQ|1|A+ 4WCQ|1|BRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*(1MA)P*CP*GP*UP*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial A1408me1A-mutant ribosomal decoding site in complex with geneticinX-RAY DIFFRACTION2.12015-09-09
274F8V|1|A+ 4F8V|1|BRNA (5'-R(P*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial ribosomal decoding site in complex with sisomicin (P21212 form)X-RAY DIFFRACTION2.82012-08-15
283WRU|1|A+ 3WRU|1|BRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial ribosomal decoding site in complex with synthetic aminoglycoside with F-HABA groupX-RAY DIFFRACTION2.32014-11-05
294F8U|1|A+ 4F8U|1|BRNA (5'-R(P*UP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'), RNA (5'-R(P*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial ribosomal decoding site in complex with sisomicin (C2 form)X-RAY DIFFRACTION22012-08-15
303S4P|1|A+ 3S4P|1|BRNA (5'-R(P*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial ribosomal decoding site complexed with an amphiphilic paromomycin O2''-ether analogueX-RAY DIFFRACTION2.562011-09-21
314P20|1|A+ 4P20|1|B5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Crystal structures of the bacterial ribosomal decoding site complexed with amikacinX-RAY DIFFRACTION2.72014-05-07
321LC4|1|A+ 1LC4|1|B5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Crystal Structure of Tobramycin Bound to the Eubacterial 16S rRNA A SiteX-RAY DIFFRACTION2.542003-04-08
332ET3|1|A+ 2ET3|1|B5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Complex Between Gentamicin C1A and the 16S-RRNA A-SiteX-RAY DIFFRACTION2.82005-12-13
345ZEJ|1|A+ 5ZEJ|1|BRNA (5'-R(P*UP*GP*CP*GP*UP*CP*(1MA)P*CP*GP*UP*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial A1408me1A-mutant ribosomal decoding site in complex with paromomycinX-RAY DIFFRACTION3.52018-03-21
355ZEM|1|A+ 5ZEM|1|BRNA (5'-R(P*UP*GP*CP*GP*UP*CP*(1MA)P*CP*GP*UP*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial A1408me1A-mutant ribosomal decoding site in the presence of gentamicinX-RAY DIFFRACTION3.12018-03-21
365Z71|1|B+ 5Z71|1|ARNA (5'-R(P*UP*GP*CP*GP*UP*CP*GP*CP*UP*CP*CP*GP*GP*AP*AP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the Homo Sapiens cytoplasmic ribosomal decoding site in complex with G418 (P21212 form)X-RAY DIFFRACTION2.52019-01-30
374WCR|1|A+ 4WCR|1|BRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*(1MA)P*CP*GP*UP*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial A1408me1A-mutant ribosomal decoding site in complex with paromomycinX-RAY DIFFRACTION3.52015-09-09
384WCS|1|A+ 4WCS|1|BRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*(1MA)P*CP*GP*UP*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial A1408me1A-mutant ribosomal decoding site in the presence of gentamicinX-RAY DIFFRACTION3.12015-09-09
392BE0|1|A+ 2BE0|1|B5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Complex Between Paromomycin Derivative JS5-39 and the 16S-Rrna A-Site.X-RAY DIFFRACTION2.632005-12-20
402BEE|1|A+ 2BEE|1|B5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Complex Between Paromomycin derivative JS4 and the 16S-Rrna A SiteX-RAY DIFFRACTION2.62005-12-20
411J7T|1|A+ 1J7T|1|B5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Complex between Paromomycin and the 16S-rRNA A-site at 2.5 A resolutionX-RAY DIFFRACTION2.52002-05-18
422G5Q|1|A+ 2G5Q|1|B5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Crystal structures of the bacterial ribosomal decoding site complexed with amikacin.X-RAY DIFFRACTION2.72006-10-03
431YRJ|1|A+ 1YRJ|1|BBacterial 16 S Ribosomal RNA A Site OligonucleotideCrystal Structure of Apramycin bound to a Ribosomal RNA A site oligonucleotideX-RAY DIFFRACTION2.72005-06-07
442F4T|1|B+ 2F4T|1|A5'-R(*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3', 5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Asite RNA + designer antibioticX-RAY DIFFRACTION32006-05-02

Release history

Release3.753.763.773.783.793.803.813.823.833.843.853.863.873.883.893.903.913.923.933.943.953.963.973.983.993.100
Date2019-05-242019-05-312019-06-072019-06-142019-06-212019-06-282019-07-052019-07-122019-07-192019-07-262019-08-022019-08-092019-08-162019-08-232019-08-282019-09-042019-09-112019-09-192019-09-252019-10-032019-10-092019-10-162019-10-232019-10-302019-11-062019-11-13

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_71199.1NR_all_03323.13.75(1) 5ZEI|1|A+5ZEI|1|B(43) 4WCQ|1|A+4WCQ|1|B, 4WCP|1|A+4WCP|1|B+4WCP|1|C, 4PDQ|1|A+4PDQ|1|B, 4P3S|1|B+4P3S|1|A, 4P20|1|A+4P20|1|B, 4K32|1|A+4K32|1|B, 4GPY|1|A+4GPY|1|B, 4GPX|1|A+4GPX|1|B, 4GPW|1|A+4GPW|1|B, 4F8V|1|A+4F8V|1|B, 4F8U|1|A+4F8U|1|B, 3WRU|1|A+3WRU|1|B, 3TD1|1|B+3TD1|1|A, 3S4P|1|A+3S4P|1|B, 3BNL|1|A+3BNL|1|B, 2PWT|1|A+2PWT|1|B, 2G5Q|1|A+2G5Q|1|B, 2F4T|1|B+2F4T|1|A, 2ET5|1|A+2ET5|1|B, 5ZEM|1|A+5ZEM|1|B, 2ET4|1|A+2ET4|1|B, 5ZEJ|1|A+5ZEJ|1|B, 2ET3|1|A+2ET3|1|B, 5ZEG|1|A+5ZEG|1|B+5ZEG|1|C, 2ESJ|1|A+2ESJ|1|B, 5Z71|1|B+5Z71|1|A, 2ESI|1|A+2ESI|1|B, 5Z1I|1|A, 2BEE|1|A+2BEE|1|B, 5Z1H|1|B+5Z1H|1|A, 2BE0|1|A+2BE0|1|B, 5XZ1|1|C+5XZ1|1|D, 1YRJ|1|A+1YRJ|1|B, 5XZ1|1|A+5XZ1|1|B, 1MWL|1|A+1MWL|1|B, 5BXK|1|C+5BXK|1|D, 1LC4|1|A+1LC4|1|B, 5BXK|1|A+5BXK|1|B, 1J7T|1|A+1J7T|1|B, 5BWS|1|C+5BWS|1|D, 5BWS|1|A+5BWS|1|B, 4WCS|1|A+4WCS|1|B, 4WCR|1|A+4WCR|1|B(0)
NR_all_71199.1NR_all_46565.13.75(1) 5ZEG|1|A+5ZEG|1|B+5ZEG|1|C(43) 3WRU|1|A+3WRU|1|B, 3TD1|1|B+3TD1|1|A, 3S4P|1|A+3S4P|1|B, 3BNL|1|A+3BNL|1|B, 2PWT|1|A+2PWT|1|B, 2G5Q|1|A+2G5Q|1|B, 2F4T|1|B+2F4T|1|A, 2ET5|1|A+2ET5|1|B, 5ZEM|1|A+5ZEM|1|B, 2ET4|1|A+2ET4|1|B, 5ZEJ|1|A+5ZEJ|1|B, 2ET3|1|A+2ET3|1|B, 5ZEI|1|A+5ZEI|1|B, 5Z71|1|B+5Z71|1|A, 2ESJ|1|A+2ESJ|1|B, 5Z1I|1|A, 2ESI|1|A+2ESI|1|B, 5Z1H|1|B+5Z1H|1|A, 2BEE|1|A+2BEE|1|B, 5XZ1|1|C+5XZ1|1|D, 2BE0|1|A+2BE0|1|B, 5XZ1|1|A+5XZ1|1|B, 1YRJ|1|A+1YRJ|1|B, 5BXK|1|C+5BXK|1|D, 1MWL|1|A+1MWL|1|B, 5BXK|1|A+5BXK|1|B, 1LC4|1|A+1LC4|1|B, 5BWS|1|C+5BWS|1|D, 1J7T|1|A+1J7T|1|B, 5BWS|1|A+5BWS|1|B, 4WCS|1|A+4WCS|1|B, 4WCR|1|A+4WCR|1|B, 4WCQ|1|A+4WCQ|1|B, 4WCP|1|A+4WCP|1|B+4WCP|1|C, 4PDQ|1|A+4PDQ|1|B, 4P3S|1|B+4P3S|1|A, 4P20|1|A+4P20|1|B, 4K32|1|A+4K32|1|B, 4GPY|1|A+4GPY|1|B, 4GPX|1|A+4GPX|1|B, 4GPW|1|A+4GPW|1|B, 4F8V|1|A+4F8V|1|B, 4F8U|1|A+4F8U|1|B(0)
NR_all_71199.1NR_all_50848.13.75(1) 5ZEJ|1|A+5ZEJ|1|B(43) 2ESI|1|A+2ESI|1|B, 5Z1I|1|A, 2BEE|1|A+2BEE|1|B, 5Z1H|1|B+5Z1H|1|A, 2BE0|1|A+2BE0|1|B, 5XZ1|1|C+5XZ1|1|D, 1YRJ|1|A+1YRJ|1|B, 5XZ1|1|A+5XZ1|1|B, 1MWL|1|A+1MWL|1|B, 5BXK|1|C+5BXK|1|D, 1LC4|1|A+1LC4|1|B, 5BXK|1|A+5BXK|1|B, 1J7T|1|A+1J7T|1|B, 5BWS|1|C+5BWS|1|D, 5BWS|1|A+5BWS|1|B, 4WCS|1|A+4WCS|1|B, 4WCR|1|A+4WCR|1|B, 4WCQ|1|A+4WCQ|1|B, 4WCP|1|A+4WCP|1|B+4WCP|1|C, 4PDQ|1|A+4PDQ|1|B, 4P3S|1|B+4P3S|1|A, 4P20|1|A+4P20|1|B, 4K32|1|A+4K32|1|B, 4GPY|1|A+4GPY|1|B, 4GPX|1|A+4GPX|1|B, 4GPW|1|A+4GPW|1|B, 4F8V|1|A+4F8V|1|B, 4F8U|1|A+4F8U|1|B, 3WRU|1|A+3WRU|1|B, 3TD1|1|B+3TD1|1|A, 3S4P|1|A+3S4P|1|B, 3BNL|1|A+3BNL|1|B, 2PWT|1|A+2PWT|1|B, 2G5Q|1|A+2G5Q|1|B, 2F4T|1|B+2F4T|1|A, 2ET5|1|A+2ET5|1|B, 5ZEM|1|A+5ZEM|1|B, 2ET4|1|A+2ET4|1|B, 5ZEI|1|A+5ZEI|1|B, 2ET3|1|A+2ET3|1|B, 5ZEG|1|A+5ZEG|1|B+5ZEG|1|C, 2ESJ|1|A+2ESJ|1|B, 5Z71|1|B+5Z71|1|A(0)
NR_all_71199.1NR_all_97151.33.75(41) 5Z71|1|B+5Z71|1|A, 2ET4|1|A+2ET4|1|B, 3WRU|1|A+3WRU|1|B, 4WCQ|1|A+4WCQ|1|B, 5Z1I|1|A, 2ET3|1|A+2ET3|1|B, 4WCP|1|A+4WCP|1|B+4WCP|1|C, 3TD1|1|B+3TD1|1|A, 5Z1H|1|B+5Z1H|1|A, 2ESJ|1|A+2ESJ|1|B, 4PDQ|1|A+4PDQ|1|B, 3S4P|1|A+3S4P|1|B, 5XZ1|1|C+5XZ1|1|D, 2ESI|1|A+2ESI|1|B, 4P3S|1|B+4P3S|1|A, 3BNL|1|A+3BNL|1|B, 5XZ1|1|A+5XZ1|1|B, 2BEE|1|A+2BEE|1|B, 4P20|1|A+4P20|1|B, 2PWT|1|A+2PWT|1|B, 2BE0|1|A+2BE0|1|B, 5BXK|1|C+5BXK|1|D, 4K32|1|A+4K32|1|B, 1YRJ|1|A+1YRJ|1|B, 5BXK|1|A+5BXK|1|B, 4GPY|1|A+4GPY|1|B, 5BWS|1|C+5BWS|1|D, 1MWL|1|A+1MWL|1|B, 4GPX|1|A+4GPX|1|B, 2G5Q|1|A+2G5Q|1|B, 5BWS|1|A+5BWS|1|B, 1LC4|1|A+1LC4|1|B, 4GPW|1|A+4GPW|1|B, 2F4T|1|B+2F4T|1|A, 4WCS|1|A+4WCS|1|B, 1J7T|1|A+1J7T|1|B, 4F8V|1|A+4F8V|1|B, 5ZEM|1|A+5ZEM|1|B, 2ET5|1|A+2ET5|1|B, 4WCR|1|A+4WCR|1|B, 4F8U|1|A+4F8U|1|B(3) 5ZEG|1|A+5ZEG|1|B+5ZEG|1|C, 5ZEJ|1|A+5ZEJ|1|B, 5ZEI|1|A+5ZEI|1|B(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
14PDQ|1|A+4PDQ|1|BCrystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neomycin analogX-RAY DIFFRACTION323
23BNL|1|A+3BNL|1|BCrystal structure of the bacterial ribosomal decoding A site in the presence of [Co(NH3)6]Cl3X-RAY DIFFRACTION2.622
35BXK|1|C+5BXK|1|DCrystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (equatorial 4'-F)X-RAY DIFFRACTION3.123
45BWS|1|C+5BWS|1|DCrystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (axial 4'-F)X-RAY DIFFRACTION2.623
55ZEG|1|A+5ZEG|1|B+5ZEG|1|CCrystal structure of the bacterial A1408me1A-mutant ribosomal decoding siteX-RAY DIFFRACTION2.422
64WCP|1|A+4WCP|1|B+4WCP|1|CCrystal structure of the bacterial A1408me1A-mutant ribosomal decoding siteX-RAY DIFFRACTION2.422
75BXK|1|A+5BXK|1|BCrystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (equatorial 4'-F)X-RAY DIFFRACTION3.122
85BWS|1|A+5BWS|1|BCrystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (axial 4'-F)X-RAY DIFFRACTION2.623
93TD1|1|B+3TD1|1|ACrystal structure of the bacterial A1408G-mutant and the protozoa cytoplasmic ribosomal decoding site in complex with geneticinX-RAY DIFFRACTION2.122
105Z1I|1|ACrystal structure of the protozoal cytoplasmic ribosomal decoding site in complex with 6'-fluoro sisomicinX-RAY DIFFRACTION1.921
115ZEM|1|A+5ZEM|1|BCrystal structure of the bacterial A1408me1A-mutant ribosomal decoding site in the presence of gentamicinX-RAY DIFFRACTION3.121
124WCS|1|A+4WCS|1|BCrystal structure of the bacterial A1408me1A-mutant ribosomal decoding site in the presence of gentamicinX-RAY DIFFRACTION3.121
135ZEJ|1|A+5ZEJ|1|BCrystal structure of the bacterial A1408me1A-mutant ribosomal decoding site in complex with paromomycinX-RAY DIFFRACTION3.521
144WCR|1|A+4WCR|1|BCrystal structure of the bacterial A1408me1A-mutant ribosomal decoding site in complex with paromomycinX-RAY DIFFRACTION3.521
154WCQ|1|A+4WCQ|1|BCrystal structure of the bacterial A1408me1A-mutant ribosomal decoding site in complex with geneticinX-RAY DIFFRACTION2.121
165ZEI|1|A+5ZEI|1|BCrystal structure of the bacterial A1408me1A-mutant ribosomal decoding site in complex with geneticinX-RAY DIFFRACTION2.121
174P3S|1|B+4P3S|1|ACrystal structure of the bacterial A1408C-mutant ribosomal decoding site in complex with geneticinX-RAY DIFFRACTION2.321
184GPY|1|A+4GPY|1|BCrystal structure of the bacterial ribosomal decoding site in complex with 6'-hydroxysisomicinX-RAY DIFFRACTION2.822
192G5Q|1|A+2G5Q|1|BCrystal structures of the bacterial ribosomal decoding site complexed with amikacin.X-RAY DIFFRACTION2.721
204P20|1|A+4P20|1|BCrystal structures of the bacterial ribosomal decoding site complexed with amikacinX-RAY DIFFRACTION2.721
211LC4|1|A+1LC4|1|BCrystal Structure of Tobramycin Bound to the Eubacterial 16S rRNA A SiteX-RAY DIFFRACTION2.5421
222ESI|1|A+2ESI|1|BComplex between Kanamycin A and the 16S-Rrna A Site.X-RAY DIFFRACTION323
233WRU|1|A+3WRU|1|BCrystal structure of the bacterial ribosomal decoding site in complex with synthetic aminoglycoside with F-HABA groupX-RAY DIFFRACTION2.321
241YRJ|1|A+1YRJ|1|BCrystal Structure of Apramycin bound to a Ribosomal RNA A site oligonucleotideX-RAY DIFFRACTION2.723
252PWT|1|A+2PWT|1|BCrystal structure of the bacterial ribosomal decoding site complexed with aminoglycoside containing the L-HABA groupX-RAY DIFFRACTION1.821
262BE0|1|A+2BE0|1|BComplex Between Paromomycin Derivative JS5-39 and the 16S-Rrna A-Site.X-RAY DIFFRACTION2.6321
272BEE|1|A+2BEE|1|BComplex Between Paromomycin derivative JS4 and the 16S-Rrna A SiteX-RAY DIFFRACTION2.621
283S4P|1|A+3S4P|1|BCrystal structure of the bacterial ribosomal decoding site complexed with an amphiphilic paromomycin O2''-ether analogueX-RAY DIFFRACTION2.5621
295Z1H|1|B+5Z1H|1|ACrystal structure of the bacterial ribosomal decoding site in complex with 6'-fluoro sisomicinX-RAY DIFFRACTION2.423
302F4T|1|B+2F4T|1|AAsite RNA + designer antibioticX-RAY DIFFRACTION323
312ESJ|1|A+2ESJ|1|BComplex between Lividomycin A and the 16S-Rrna A SiteX-RAY DIFFRACTION2.221
322ET5|1|A+2ET5|1|BComplex Between Ribostamycin and the 16S-RRNA A-SiteX-RAY DIFFRACTION2.221
331J7T|1|A+1J7T|1|BComplex between Paromomycin and the 16S-rRNA A-site at 2.5 A resolutionX-RAY DIFFRACTION2.521
342ET4|1|A+2ET4|1|BComplex Between Neomycin B and the 16S-RRNA A-SiteX-RAY DIFFRACTION2.421
352ET3|1|A+2ET3|1|BComplex Between Gentamicin C1A and the 16S-RRNA A-SiteX-RAY DIFFRACTION2.821
364F8V|1|A+4F8V|1|BCrystal structure of the bacterial ribosomal decoding site in complex with sisomicin (P21212 form)X-RAY DIFFRACTION2.821
371MWL|1|A+1MWL|1|BCrystal structure of geneticin bound to the eubacterial 16S rRNA A siteX-RAY DIFFRACTION2.424
384F8U|1|A+4F8U|1|BCrystal structure of the bacterial ribosomal decoding site in complex with sisomicin (C2 form)X-RAY DIFFRACTION222
395XZ1|1|A+5XZ1|1|BCrystal structure of the Homo Sapiens cytoplasmic ribosomal decoding site in complex with G418X-RAY DIFFRACTION3.0122
404K32|1|A+4K32|1|BCrystal structure of geneticin bound to the leishmanial rRNA A-siteX-RAY DIFFRACTION2.521
414GPW|1|A+4GPW|1|BCrystal structure of the protozoal cytoplasmic ribosomal decoding site in complex with 6'-hydroxysisomicin (P21212 form)X-RAY DIFFRACTION322
424GPX|1|A+4GPX|1|BCrystal structure of the protozoal cytoplasmic ribosomal decoding site in complex with 6'-hydroxysisomicin (P212121 form)X-RAY DIFFRACTION2.621
435XZ1|1|C+5XZ1|1|DCrystal structure of the Homo Sapiens cytoplasmic ribosomal decoding site in complex with G418X-RAY DIFFRACTION3.0122
445Z71|1|B+5Z71|1|ACrystal structure of the Homo Sapiens cytoplasmic ribosomal decoding site in complex with G418 (P21212 form)X-RAY DIFFRACTION2.522