Equivalence class NR_all_72076.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 3JAM|1|2 (rep) | Small subunit ribosomal RNA | 18S rRNA | Kluyveromyces lactis | Eukarya | RF01960 | CryoEM structure of 40S-eIF1A-eIF1 complex from yeast | Electron microscopy | 3.46 | 2015-08-12 |
| 2 | 3JAQ|1|2 | Small subunit ribosomal RNA | 18S rRNA | Kluyveromyces lactis | Eukarya | RF01960 | Structure of a partial yeast 48S preinitiation complex in open conformation | Electron microscopy | 6 | 2015-08-12 |
| 3 | 3JAP|1|2 | Small subunit ribosomal RNA | 18S rRNA | Kluyveromyces lactis | Eukarya | RF01960 | Structure of a partial yeast 48S preinitiation complex in closed conformation | Electron microscopy | 4.9 | 2015-08-12 |
| 4 | 3J80|1|2 | Small subunit ribosomal RNA | 18S rRNA | Kluyveromyces lactis | Eukarya | RF01960 | CryoEM structure of 40S-eIF1-eIF1A preinitiation complex | Electron microscopy | 3.75 | 2014-11-05 |
| 5 | 3J81|1|2 | Small subunit ribosomal RNA | 18S rRNA | Kluyveromyces lactis | Eukarya | RF01960 | CryoEM structure of a partial yeast 48S preinitiation complex | Electron microscopy | 4 | 2014-11-05 |
| 6 | 4V92|1|A2 | Small subunit ribosomal RNA | 18S RRNA | Kluyveromyces lactis | Eukarya | RF01960 | Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES | Electron microscopy | 3.7 | 2014-07-09 |
Release history
| Release | 2.36 | 2.37 | 2.38 | 2.39 | 2.40 | 2.41 | 2.42 | 2.43 | 2.44 | 2.45 | 2.46 | 2.47 | 2.48 | 2.49 | 2.50 | 2.51 | 2.52 | 2.53 | 2.54 | 2.55 | 2.56 | 2.57 | 2.58 | 2.59 | 2.60 | 2.61 | 2.62 | 2.63 | 2.64 | 2.65 | 2.66 | 2.67 | 2.68 | 2.69 | 2.70 | 2.71 | 2.72 | 2.73 | 2.74 | 2.75 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2015-08-14 | 2015-08-21 | 2015-08-28 | 2015-09-04 | 2015-09-11 | 2015-09-18 | 2015-09-25 | 2015-10-02 | 2015-10-09 | 2015-10-16 | 2015-10-23 | 2015-10-30 | 2015-11-06 | 2015-11-13 | 2015-11-20 | 2015-11-27 | 2015-12-04 | 2015-12-11 | 2015-12-18 | 2015-12-25 | 2016-01-01 | 2016-01-08 | 2016-01-15 | 2016-01-22 | 2016-01-29 | 2016-02-05 | 2016-02-12 | 2016-02-19 | 2016-02-26 | 2016-03-04 | 2016-03-11 | 2016-03-18 | 2016-03-25 | 2016-04-01 | 2016-04-08 | 2016-04-15 | 2016-04-22 | 2016-04-29 | 2016-05-06 | 2016-05-13 |
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_72076.1 | NR_20.0_72076.2 | 2.76 | (6) 3J81|1|2, 3JAP|1|2, 4V92|1|A2, 3J80|1|2, 3JAM|1|2, 3JAQ|1|2 | (0) | (2) 5IT7|1|2, 5IT9|1|2 |
| NR_all_72076.1 | NR_3.5_72076.2 | 2.76 | (1) 3JAM|1|2 | (5) 3JAP|1|2, 3J81|1|2, 4V92|1|A2, 3J80|1|2, 3JAQ|1|2 | (0) |
| NR_all_72076.1 | NR_4.0_72076.2 | 2.76 | (4) 3J80|1|2, 3J81|1|2, 3JAM|1|2, 4V92|1|A2 | (2) 3JAQ|1|2, 3JAP|1|2 | (2) 5IT7|1|2, 5IT9|1|2 |
| NR_all_72076.1 | NR_all_72076.2 | 2.76 | (6) 3J80|1|2, 3JAM|1|2, 3JAQ|1|2, 3J81|1|2, 3JAP|1|2, 4V92|1|A2 | (0) | (2) 5IT9|1|2, 5IT7|1|2 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 3J81|1|2 | CryoEM structure of a partial yeast 48S preinitiation complex | ELECTRON MICROSCOPY | 4 | 1780 |
| 2 | 3JAP|1|2 | Structure of a partial yeast 48S preinitiation complex in closed conformation | ELECTRON MICROSCOPY | 4.9 | 1780 |
| 3 | 3JAM|1|2 | CryoEM structure of 40S-eIF1A-eIF1 complex from yeast | ELECTRON MICROSCOPY | 3.46 | 1780 |
| 4 | 3J80|1|2 | CryoEM structure of 40S-eIF1-eIF1A preinitiation complex | ELECTRON MICROSCOPY | 3.75 | 1779 |
| 5 | 4V92|1|A2 | Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES | ELECTRON MICROSCOPY | 3.7 | 1764 |
| 6 | 3JAQ|1|2 | Structure of a partial yeast 48S preinitiation complex in open conformation | ELECTRON MICROSCOPY | 6 | 1780 |