Equivalence class NR_all_73286.2 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5MQF|1|5 (rep) | U5 spliceosomal RNA | Homo sapiens U5 A small nuclear RNA, MINX pre-mRNA (intron) | Homo sapiens | Eukarya | RF00020 | Cryo-EM structure of a human spliceosome activated for step 2 of splicing (C* complex) | Electron microscopy | 5.9 | 2017-03-22 |
| 2 | 5XJC|1|B | U5 spliceosomal RNA | U5 snRNA, pre-mRNA | Homo sapiens | Eukarya | RF00020 | Cryo-EM structure of the human spliceosome just prior to exon ligation at 3.6 angstrom | Electron microscopy | 3.6 | 2017-07-05 |
| 3 | 3JCR|1|H | U5 spliceosomal RNA | U5 snRNA | Homo sapiens | Eukarya | RF00020 | 3D structure determination of the human*U4/U6.U5* tri-snRNP complex | Electron microscopy | 7 | 2016-03-09 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_all_73286.2 | NR_all_73286.1 | 2.136 | (2) 5MQF|1|5, 3JCR|1|H | (1) 5XJC|1|B | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 5XJC|1|B | Cryo-EM structure of the human spliceosome just prior to exon ligation at 3.6 angstrom | ELECTRON MICROSCOPY | 3.6 | 84 |
| 2 | 5MQF|1|5 | Cryo-EM structure of a human spliceosome activated for step 2 of splicing (C* complex) | ELECTRON MICROSCOPY | 5.9 | 114 |
| 3 | 3JCR|1|H | 3D structure determination of the human*U4/U6.U5* tri-snRNP complex | ELECTRON MICROSCOPY | 7 | 63 |