Equivalence class NR_all_73428.2 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6VMI|1|B (rep) | Transfer RNA | tRNAval | Homo sapiens | Mitochondria | RF00005 | Structure of the human mitochondrial ribosome-EF-G1 complex (ClassIII) | Electron microscopy | 2.96 | 56 | 2020-08-05 |
| 2 | 6VLZ|1|B | Transfer RNA | tRNAval | Homo sapiens | Mitochondria | RF00005 | Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI) | Electron microscopy | 2.97 | 56 | 2020-08-05 |
| 3 | 5OOL|1|B | Transfer RNA | mitochondrial tRNAVal | Homo sapiens | Mitochondria | RF00005 | Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNA | Electron microscopy | 3.06 | 56 | 2017-09-13 |
| 4 | 5OOM|1|B | Transfer RNA | mitochondrial tRNAVal | Homo sapiens | Mitochondria | RF00005 | Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNA | Electron microscopy | 3.03 | 56 | 2017-09-13 |
| 5 | 6ZSC|1|XB | Transfer RNA | mt-tRNAVal | Homo sapiens | Mitochondria | RF00005 | Human mitochondrial ribosome in complex with E-site tRNA | Electron microscopy | 3.5 | 59 | 2020-09-16 |
| 6 | 6ZSD|1|XB | Transfer RNA | mt-tRNAVal | Homo sapiens | Mitochondria | RF00005 | Human mitochondrial ribosome in complex with mRNA, P-site tRNA and E-site tRNA | Electron microscopy | 3.7 | 59 | 2020-09-16 |
| 7 | 6I9R|1|B | Transfer RNA | tRNA Val | Homo sapiens | Mitochondria | RF00005 | Large subunit of the human mitochondrial ribosome in complex with Virginiamycin M and Quinupristin | Electron microscopy | 3.9 | 60 | 2020-07-08 |
| 8 | 3J7Y|1|B | Transfer RNA | mt-tRNAVal | Homo sapiens | Mitochondria | RF00005 | Structure of the large ribosomal subunit from human mitochondria | Electron microscopy | 3.4 | 57 | 2014-10-15 |
| 9 | 6ZS9|1|XB | Transfer RNA | mt-tRNAVal | Homo sapiens | Mitochondria | RF00005 | Human mitochondrial ribosome in complex with ribosome recycling factor | Electron microscopy | 4 | 59 | 2020-10-14 |
| 10 | 6ZSG|1|XB | Transfer RNA | mt-tRNA Val | Homo sapiens | Mitochondria | RF00005 | Human mitochondrial ribosome in complex with mRNA, A-site tRNA, P-site tRNA and E-site tRNA | Electron microscopy | 4 | 59 | 2020-10-14 |
| 11 | 3J9M|1|B | Transfer RNA | mt-tRNAVal | Homo sapiens | Mitochondria | RF00005 | Structure of the human mitochondrial ribosome (class 1) | Electron microscopy | 3.5 | 56 | 2015-04-15 |
| 12 | 6ZSB|1|XB | Transfer RNA | mt-tRNAVal | Homo sapiens | Mitochondria | RF00005 | Human mitochondrial ribosome in complex with mRNA and P-site tRNA | Electron microscopy | 4.5 | 59 | 2020-09-16 |
| 13 | 6ZSE|1|XB | Transfer RNA | mt-tRNAVal | Homo sapiens | Mitochondria | RF00005 | Human mitochondrial ribosome in complex with mRNA, A/P-tRNA and P/E-tRNA | Electron microscopy | 5 | 59 | 2020-09-16 |
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 6ZSG|1|XB | Human mitochondrial ribosome in complex with mRNA, A-site tRNA, P-site tRNA and E-site tRNA | ELECTRON MICROSCOPY | 4 | 59 | |
| 2 | 6ZSD|1|XB | Human mitochondrial ribosome in complex with mRNA, P-site tRNA and E-site tRNA | ELECTRON MICROSCOPY | 3.7 | 59 | |
| 3 | 6ZSC|1|XB | Human mitochondrial ribosome in complex with E-site tRNA | ELECTRON MICROSCOPY | 3.5 | 59 | |
| 4 | 6ZSB|1|XB | Human mitochondrial ribosome in complex with mRNA and P-site tRNA | ELECTRON MICROSCOPY | 4.5 | 59 | |
| 5 | 6ZS9|1|XB | Human mitochondrial ribosome in complex with ribosome recycling factor | ELECTRON MICROSCOPY | 4 | 59 | |
| 6 | 6ZSE|1|XB | Human mitochondrial ribosome in complex with mRNA, A/P-tRNA and P/E-tRNA | ELECTRON MICROSCOPY | 5 | 59 | |
| 7 | 6I9R|1|B | Large subunit of the human mitochondrial ribosome in complex with Virginiamycin M and Quinupristin | ELECTRON MICROSCOPY | 3.9 | 60 | |
| 8 | 6VMI|1|B | Structure of the human mitochondrial ribosome-EF-G1 complex (ClassIII) | ELECTRON MICROSCOPY | 2.96 | 56 | |
| 9 | 6VLZ|1|B | Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI) | ELECTRON MICROSCOPY | 2.97 | 56 | |
| 10 | 5OOM|1|B | Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNA | ELECTRON MICROSCOPY | 3.03 | 56 | |
| 11 | 5OOL|1|B | Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNA | ELECTRON MICROSCOPY | 3.06 | 56 | |
| 12 | 3J9M|1|B | Structure of the human mitochondrial ribosome (class 1) | ELECTRON MICROSCOPY | 3.5 | 56 | |
| 13 | 3J7Y|1|B | Structure of the large ribosomal subunit from human mitochondria | ELECTRON MICROSCOPY | 3.4 | 57 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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