BGSU RNA Site //

Equivalence class NR_all_74023.1 Obsolete

#IFEStandardized nameMoleculeOrganismDomainRfamTitleMethodÅDate
15ND8|1|a (rep)Small subunit ribosomal RNA16S ribosomal RNAStaphylococcus aureusBacteriaRF00177Hibernating ribosome from Staphylococcus aureus (Unrotated state)Electron microscopy3.72017-06-28
25ND9|1|aSmall subunit ribosomal RNA16S ribosomal RNAStaphylococcus aureusBacteriaRF00177Hibernating ribosome from Staphylococcus aureus (Rotated state)Electron microscopy3.72017-06-28
35LI0|1|aSmall subunit ribosomal RNA16S ribosomal RNAStaphylococcus aureusBacteriaRF0017770S ribosome from Staphylococcus aureusElectron microscopy3.82016-12-28
45NGM|1|AaSmall subunit ribosomal RNA16S ribosomal RNAStaphylococcus aureusBacteriaRF001772.9S structure of the 70S ribosome composing the S. aureus 100S complexElectron microscopy2.92017-10-04
55NG8|1|Aa16S ribosomal RNAThe cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureusElectron microscopy6.762017-10-04
65NG8|1|Ba16S ribosomal RNAThe cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureusElectron microscopy6.762017-10-04
75TCU|1|ASmall subunit ribosomal RNA16S RRNAStaphylococcus aureusBacteriaRF00177Methicillin sensitive Staphylococcus aureus 70S ribosomeElectron microscopy3.92017-05-24
85T7V|1|ASmall subunit ribosomal RNA16S ribosomal RNAStaphylococcus aureusBacteriaRF00177Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)Electron microscopy3.62017-05-31

Release history

Release2.1492.1502.1512.1522.1532.1542.1552.1562.1572.1583.03.13.23.33.43.53.63.73.83.93.103.113.123.13
Date2017-10-072017-10-142017-10-212017-10-282017-11-032017-11-102017-11-172017-11-242017-12-012017-12-082017-12-152017-12-222017-12-292018-01-052018-01-122018-01-192018-01-262018-02-022018-02-092018-02-162018-02-232018-03-012018-03-082018-03-15

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_74023.1NR_all_62109.12.149(5) 5T7V|1|A, 5ND9|1|a, 5ND8|1|a, 5LI0|1|a, 5TCU|1|A(3) 5NG8|1|Ba, 5NG8|1|Aa, 5NGM|1|Aa(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_74023.1NR_all_74023.23.14(8) 5NG8|1|Aa, 5ND9|1|a, 5ND8|1|a, 5LI0|1|a, 5TCU|1|A, 5T7V|1|A, 5NGM|1|Aa, 5NG8|1|Ba(0) (2) 6FXC|1|Aa, 6FXC|1|Ba

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
15NG8|1|AaThe cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureusELECTRON MICROSCOPY6.761539
25NGM|1|Aa2.9S structure of the 70S ribosome composing the S. aureus 100S complexELECTRON MICROSCOPY2.91539
35NG8|1|BaThe cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureusELECTRON MICROSCOPY6.761539
45ND9|1|aHibernating ribosome from Staphylococcus aureus (Rotated state)ELECTRON MICROSCOPY3.71541
55ND8|1|aHibernating ribosome from Staphylococcus aureus (Unrotated state)ELECTRON MICROSCOPY3.71542
65LI0|1|a70S ribosome from Staphylococcus aureusELECTRON MICROSCOPY3.81547
75TCU|1|AMethicillin sensitive Staphylococcus aureus 70S ribosomeELECTRON MICROSCOPY3.91464
85T7V|1|AMethicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)ELECTRON MICROSCOPY3.61419