Equivalence class NR_all_74023.6 Obsolete
# | IFE | Compound(s) | RNA source organism | Title | Method | Resolution | Date |
---|---|---|---|---|---|---|---|
1 | 6S0X|1|a (rep) | 16S ribosomal RNA | Staphylococcus aureus | Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin. | ELECTRON MICROSCOPY | 2.42 | 2019-08-21 |
2 | 5NGM|1|Aa | 16S ribosomal RNA | Staphylococcus aureus | 2.9S structure of the 70S ribosome composing the S. aureus 100S complex | ELECTRON MICROSCOPY | 2.9 | 2017-10-04 |
3 | 7NHL|1|a | 16S rRNA, RNA (5'-R(P*GP*GP*AP*GP*GP*UP*AP*UP*G)-3') | Staphylococcus aureus subsp. aureus NCTC 8325 | VgaA-LC, an antibiotic resistance ABCF, in complex with 70S ribosome from Staphylococcus aureus | ELECTRON MICROSCOPY | 3.1 | 2021-05-05 |
4 | 7NHM|1|a | 16S rRNA, RNA (5'-R(P*GP*GP*AP*GP*GP*UP*NP*NP*NP*NP*NP*NP*AP*UP*G)-3') | Staphylococcus aureus subsp. aureus NCTC 8325 | 70S ribosome from Staphylococcus aureus | ELECTRON MICROSCOPY | 3.1 | 2021-05-05 |
5 | 6YEF|1|a | 16S rRNA, mRNA | Staphylococcus aureus subsp. aureus NCTC 8325 | 70S initiation complex with assigned rRNA modifications from Staphylococcus aureus | ELECTRON MICROSCOPY | 3.2 | 2021-01-27 |
6 | 6S13|1|a | 16S ribosomal RNA | Staphylococcus aureus | Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22). | ELECTRON MICROSCOPY | 3.58 | 2019-08-21 |
7 | 5ND8|1|a | 16S ribosomal RNA | Staphylococcus aureus | Hibernating ribosome from Staphylococcus aureus (Unrotated state) | ELECTRON MICROSCOPY | 3.7 | 2017-06-28 |
8 | 5ND9|1|a | 16S ribosomal RNA | Staphylococcus aureus | Hibernating ribosome from Staphylococcus aureus (Rotated state) | ELECTRON MICROSCOPY | 3.7 | 2017-06-28 |
9 | 7KWG|1|a | 16S ribosomal RNA | Staphylococcus aureus subsp. aureus NCTC 8325 | Staphylococcus aureus 30S ribosomal subunit in presence of spermidine | ELECTRON MICROSCOPY | 3.75 | 2021-01-27 |
10 | 5LI0|1|a | 16S ribosomal RNA | Staphylococcus aureus | 70S ribosome from Staphylococcus aureus | ELECTRON MICROSCOPY | 3.8 | 2016-12-28 |
11 | 5T7V|1|A | 16S ribosomal RNA | Staphylococcus aureus | Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3) | ELECTRON MICROSCOPY | 3.6 | 2017-05-31 |
12 | 5TCU|1|A | 16S RRNA | Staphylococcus aureus | Methicillin sensitive Staphylococcus aureus 70S ribosome | ELECTRON MICROSCOPY | 3.9 | 2017-05-24 |
13 | 6FXC|1|Ba | 16S ribosomal RNA | Staphylococcus aureus | The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus | ELECTRON MICROSCOPY | 6.76 | 2018-03-21 |
14 | 6FXC|1|Aa | 16S ribosomal RNA | Staphylococcus aureus | The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus | ELECTRON MICROSCOPY | 6.76 | 2018-03-21 |
Release history
Release | 3.177 | 3.178 | 3.179 | 3.180 | 3.181 | 3.182 | 3.183 | 3.184 | 3.185 | 3.186 | 3.187 | 3.188 | 3.189 | 3.190 | 3.191 | 3.192 | 3.193 | 3.194 | 3.195 | 3.196 | 3.197 | 3.198 | 3.199 | 3.200 | 3.201 | 3.202 | 3.203 | 3.204 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Date | 2021-05-05 | 2021-05-12 | 2021-05-19 | 2021-05-26 | 2021-06-02 | 2021-06-09 | 2021-06-16 | 2021-06-23 | 2021-06-30 | 2021-07-07 | 2021-07-14 | 2021-07-21 | 2021-07-28 | 2021-08-04 | 2021-08-11 | 2021-08-18 | 2021-08-25 | 2021-09-01 | 2021-09-08 | 2021-09-15 | 2021-09-22 | 2021-09-29 | 2021-10-06 | 2021-10-13 | 2021-10-20 | 2021-10-27 | 2021-11-03 | 2021-11-10 |
Parents
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).#S | PDB | Title | Method | Resolution | Length |
---|---|---|---|---|---|
1 | 6S13|1|a | Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22). | ELECTRON MICROSCOPY | 3.58 | 1539 |
2 | 6S0X|1|a | Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin. | ELECTRON MICROSCOPY | 2.42 | 1539 |
3 | 6FXC|1|Aa | The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus | ELECTRON MICROSCOPY | 6.76 | 1539 |
4 | 6FXC|1|Ba | The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus | ELECTRON MICROSCOPY | 6.76 | 1539 |
5 | 5NGM|1|Aa | 2.9S structure of the 70S ribosome composing the S. aureus 100S complex | ELECTRON MICROSCOPY | 2.9 | 1539 |
6 | 5ND9|1|a | Hibernating ribosome from Staphylococcus aureus (Rotated state) | ELECTRON MICROSCOPY | 3.7 | 1541 |
7 | 7KWG|1|a | Staphylococcus aureus 30S ribosomal subunit in presence of spermidine | ELECTRON MICROSCOPY | 3.75 | 1552 |
8 | 7NHL|1|a | VgaA-LC, an antibiotic resistance ABCF, in complex with 70S ribosome from Staphylococcus aureus | ELECTRON MICROSCOPY | 3.1 | 1538 |
9 | 7NHM|1|a | 70S ribosome from Staphylococcus aureus | ELECTRON MICROSCOPY | 3.1 | 1531 |
10 | 5LI0|1|a | 70S ribosome from Staphylococcus aureus | ELECTRON MICROSCOPY | 3.8 | 1547 |
11 | 5ND8|1|a | Hibernating ribosome from Staphylococcus aureus (Unrotated state) | ELECTRON MICROSCOPY | 3.7 | 1542 |
12 | 6YEF|1|a | 70S initiation complex with assigned rRNA modifications from Staphylococcus aureus | ELECTRON MICROSCOPY | 3.2 | 1540 |
13 | 5TCU|1|A | Methicillin sensitive Staphylococcus aureus 70S ribosome | ELECTRON MICROSCOPY | 3.9 | 1464 |
14 | 5T7V|1|A | Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3) | ELECTRON MICROSCOPY | 3.6 | 1419 |