Equivalence class NR_all_75628.2 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 8AZW|1|C (rep) | 5S ribosomal RNA | 5S rRNA | Nicotiana tabacum | Eukarya | RF00001 | Cryo-EM structure of the plant 60S subunit | Electron microscopy | 2.14 | 2023-06-07 |
| 2 | 7QIW|1|5 | 5S ribosomal RNA | 5S rRNA | Solanum lycopersicum | Eukarya | RF00001 | Specific features and methylation sites of a plant ribosome. 60S ribosomal subunit. | Electron microscopy | 2.35 | 2022-07-13 |
| 3 | 7QIZ|1|5 | 5S ribosomal RNA | 5S rRNA | Solanum lycopersicum | Eukarya | RF00001 | Specific features and methylation sites of a plant 80S ribosome | Electron microscopy | 2.38 | 2022-08-03 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_all_75628.2 | NR_all_75628.1 | 3.286 | (2) 7QIW|1|5, 7QIZ|1|5 | (1) 8AZW|1|C | (0) |
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|---|
| 1 | 7QIZ|1|5 | Specific features and methylation sites of a plant 80S ribosome | ELECTRON MICROSCOPY | 2.38 | 120 | |
| 2 | 7QIW|1|5 | Specific features and methylation sites of a plant ribosome. 60S ribosomal subunit. | ELECTRON MICROSCOPY | 2.35 | 120 | |
| 3 | 8AZW|1|C | Cryo-EM structure of the plant 60S subunit | ELECTRON MICROSCOPY | 2.14 | 119 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: