#IFECompound(s)RNA source organismTitleMethodResolutionDate
16X1B|1|D (rep)DNA (5'-R(*GP*U)-3')synthetic constructCrystal Structure of NSP15 Endoribonuclease from SARS CoV-2 in the Complex with the Product Nucleotide GpU.X-RAY DIFFRACTION1.972020-05-27
26X1B|1|FDNA (5'-R(*GP*U)-3')synthetic constructCrystal Structure of NSP15 Endoribonuclease from SARS CoV-2 in the Complex with the Product Nucleotide GpU.X-RAY DIFFRACTION1.972020-05-27
35K77|1|xbrnch 2 of branched RNA 5'-UAA(-2'GU)CA-3'Saccharomyces cerevisiaeDbr1 in complex with 7-mer branched RNAX-RAY DIFFRACTION2.172016-12-07
45K77|1|zbrnch 2 of branched RNA 5'-UAA(-2'GU)CA-3'Saccharomyces cerevisiaeDbr1 in complex with 7-mer branched RNAX-RAY DIFFRACTION2.172016-12-07
55K77|1|vbrnch 2 of branched RNA 5'-UAA(-2'GU)CA-3'Saccharomyces cerevisiaeDbr1 in complex with 7-mer branched RNAX-RAY DIFFRACTION2.172016-12-07
65K77|1|ybrnch 2 of branched RNA 5'-UAA(-2'GU)CA-3'Saccharomyces cerevisiaeDbr1 in complex with 7-mer branched RNAX-RAY DIFFRACTION2.172016-12-07
75K77|1|wbrnch 2 of branched RNA 5'-UAA(-2'GU)CA-3'Saccharomyces cerevisiaeDbr1 in complex with 7-mer branched RNAX-RAY DIFFRACTION2.172016-12-07
85F6C|1|CRNA (5'-R(P*GP*U)-3')Escherichia coliThe structure of E. coli RNase E catalytically inactive mutant with RNA boundX-RAY DIFFRACTION32016-12-14
96I0T|1|BRNA (5'-R(*GP*U)-3')Drosophila melanogasterCrystal structure of DmTailor in complex with GpUX-RAY DIFFRACTION22018-12-05
101B2M|1|C5'-R(*GP*(U34))-3'THREE-DIMENSIONAL STRUCTURE OF RIBONULCEASE T1 COMPLEXED WITH AN ISOSTERIC PHOSPHONATE ANALOGUE OF GPU: ALTERNATE SUBSTRATE BINDING MODES AND CATALYSIS.X-RAY DIFFRACTION21999-03-25
111B2M|1|D5'-R(*GP*(U34))-3'THREE-DIMENSIONAL STRUCTURE OF RIBONULCEASE T1 COMPLEXED WITH AN ISOSTERIC PHOSPHONATE ANALOGUE OF GPU: ALTERNATE SUBSTRATE BINDING MODES AND CATALYSIS.X-RAY DIFFRACTION21999-03-25
121B2M|1|E5'-R(*GP*(U34))-3'THREE-DIMENSIONAL STRUCTURE OF RIBONULCEASE T1 COMPLEXED WITH AN ISOSTERIC PHOSPHONATE ANALOGUE OF GPU: ALTERNATE SUBSTRATE BINDING MODES AND CATALYSIS.X-RAY DIFFRACTION21999-03-25

Release history

Release3.128
Date2020-05-27

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_78372.4NR_all_78372.33.128(10) 6I0T|1|B, 5K77|1|z, 5K77|1|y, 5K77|1|x, 5K77|1|w, 5K77|1|v, 5F6C|1|C, 1B2M|1|E, 1B2M|1|D, 1B2M|1|C(2) 6X1B|1|F, 6X1B|1|D(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16X1B|1|DCrystal Structure of NSP15 Endoribonuclease from SARS CoV-2 in the Complex with the Product Nucleotide GpU.X-RAY DIFFRACTION1.972
26X1B|1|FCrystal Structure of NSP15 Endoribonuclease from SARS CoV-2 in the Complex with the Product Nucleotide GpU.X-RAY DIFFRACTION1.972
35F6C|1|CThe structure of E. coli RNase E catalytically inactive mutant with RNA boundX-RAY DIFFRACTION32
41B2M|1|DTHREE-DIMENSIONAL STRUCTURE OF RIBONULCEASE T1 COMPLEXED WITH AN ISOSTERIC PHOSPHONATE ANALOGUE OF GPU: ALTERNATE SUBSTRATE BINDING MODES AND CATALYSIS.X-RAY DIFFRACTION21
51B2M|1|ETHREE-DIMENSIONAL STRUCTURE OF RIBONULCEASE T1 COMPLEXED WITH AN ISOSTERIC PHOSPHONATE ANALOGUE OF GPU: ALTERNATE SUBSTRATE BINDING MODES AND CATALYSIS.X-RAY DIFFRACTION21
61B2M|1|CTHREE-DIMENSIONAL STRUCTURE OF RIBONULCEASE T1 COMPLEXED WITH AN ISOSTERIC PHOSPHONATE ANALOGUE OF GPU: ALTERNATE SUBSTRATE BINDING MODES AND CATALYSIS.X-RAY DIFFRACTION21
76I0T|1|BCrystal structure of DmTailor in complex with GpUX-RAY DIFFRACTION22
85K77|1|xDbr1 in complex with 7-mer branched RNAX-RAY DIFFRACTION2.172
95K77|1|zDbr1 in complex with 7-mer branched RNAX-RAY DIFFRACTION2.172
105K77|1|yDbr1 in complex with 7-mer branched RNAX-RAY DIFFRACTION2.172
115K77|1|wDbr1 in complex with 7-mer branched RNAX-RAY DIFFRACTION2.172
125K77|1|vDbr1 in complex with 7-mer branched RNAX-RAY DIFFRACTION2.172