RNA 3D Hub //

Equivalence class NR_all_79924.1 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14OQ9|1|s (rep)RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Tobacco virtovirus 1VirusesSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
23I62|1|B5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'Structure of Mss116p bound to ssRNA and ADP-Aluminum FluorideX-ray diffraction1.952009-09-08
33I61|1|B5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'Structure of Mss116p bound to ssRNA and ADP-Beryllium FluorideX-ray diffraction2.12009-09-08
43I5X|1|B5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'Structure of Mss116p bound to ssRNA and AMP-PNPX-ray diffraction1.92009-09-08
54OQ9|1|fRNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Tobacco virtovirus 1VirusesSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
64NIA|1|fRNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Tobacco virtovirus 1VirusesSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
74OQ9|1|jRNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Tobacco virtovirus 1VirusesSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
84NIA|1|jRNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Tobacco virtovirus 1VirusesSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
94OQ9|1|kRNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Tobacco virtovirus 1VirusesSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
104NIA|1|kRNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Tobacco virtovirus 1VirusesSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
114OQ9|1|lRNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Tobacco virtovirus 1VirusesSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
124NIA|1|lRNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Tobacco virtovirus 1VirusesSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
134OQ9|1|oRNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Tobacco virtovirus 1VirusesSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
144NIA|1|oRNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Tobacco virtovirus 1VirusesSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
154NIA|1|pRNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Tobacco virtovirus 1VirusesSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
164OQ9|1|pRNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Tobacco virtovirus 1VirusesSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
174OQ9|1|qRNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Tobacco virtovirus 1VirusesSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
184NIA|1|qRNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Tobacco virtovirus 1VirusesSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
194OQ9|1|rRNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Tobacco virtovirus 1VirusesSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10
204NIA|1|rRNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Tobacco virtovirus 1VirusesSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
214NIA|1|sRNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Tobacco virtovirus 1VirusesSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
223I5Y|1|B5'-R(*UP*UP*UP*(5BU)P*UP*UP*UP*UP*UP*U)-3'Structure of Mss116p bound to ssRNA containing a single 5-BrU and AMP-PNPX-ray diffraction2.492009-09-08
233SQX|1|BRNA (5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Structure of Mss116p (NTE and C-tail double deletion) bound to ssRNA and AMP-PNPX-ray diffraction2.112011-10-12
243SQW|1|BRNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Structure of Mss116p (NTE deletion) bound to ssRNA and AMP-PNPX-ray diffraction1.912011-10-12
252DB3|1|E5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'Structural basis for RNA unwinding by the DEAD-box protein Drosophila VasaX-ray diffraction2.22006-05-02
262DB3|1|F5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'Structural basis for RNA unwinding by the DEAD-box protein Drosophila VasaX-ray diffraction2.22006-05-02
272DB3|1|G5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'Structural basis for RNA unwinding by the DEAD-box protein Drosophila VasaX-ray diffraction2.22006-05-02
283FHT|1|CRNA (5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Crystal structure of human Dbp5 in complex with AMPPNP and RNAX-ray diffraction2.22009-02-17
293FHT|1|DRNA (5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Crystal structure of human Dbp5 in complex with AMPPNP and RNAX-ray diffraction2.22009-02-17
302DB3|1|H5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'Structural basis for RNA unwinding by the DEAD-box protein Drosophila VasaX-ray diffraction2.22006-05-02

Release history

Release2.02.12.22.32.42.52.62.72.82.92.102.112.122.132.142.152.162.172.182.192.202.212.222.232.242.252.262.272.282.292.302.312.322.332.342.352.362.372.382.392.402.412.422.432.442.45
Date2014-12-052014-12-122014-12-192014-12-262015-01-022015-01-092015-01-162015-01-232015-01-302015-02-062015-02-132015-02-202015-02-272015-03-062015-03-132015-03-202015-03-272015-04-032015-04-102015-04-172015-04-242015-05-012015-05-082015-05-152015-05-222015-05-292015-06-052015-06-122015-06-192015-06-262015-07-032015-07-102015-07-172015-07-242015-07-312015-08-072015-08-142015-08-212015-08-282015-09-042015-09-112015-09-182015-09-252015-10-022015-10-092015-10-16

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_79924.1NR_1.5_51111.12.46(9) 4OQ9|1|s, 4OQ9|1|o, 4OQ9|1|p, 4OQ9|1|f, 4OQ9|1|j, 4OQ9|1|q, 4OQ9|1|k, 4OQ9|1|r, 4OQ9|1|l(21) 4NIA|1|q, 3I5X|1|B, 2DB3|1|F, 3SQW|1|B, 4NIA|1|p, 3FHT|1|D, 4NIA|1|f, 2DB3|1|E, 3I5Y|1|B, 4NIA|1|o, 2DB3|1|G, 3SQX|1|B, 4NIA|1|s, 4NIA|1|l, 2DB3|1|H, 4NIA|1|r, 4NIA|1|k, 3I62|1|B, 3FHT|1|C, 3I61|1|B, 4NIA|1|j(0)
NR_all_79924.1NR_2.0_51111.12.46(18) 4OQ9|1|r, 4NIA|1|s, 4OQ9|1|f, 4NIA|1|j, 4OQ9|1|k, 4NIA|1|l, 4OQ9|1|l, 4NIA|1|o, 4OQ9|1|o, 4NIA|1|p, 4OQ9|1|q, 4NIA|1|r, 4OQ9|1|s, 4OQ9|1|j, 4NIA|1|k, 4OQ9|1|p, 4NIA|1|q, 4NIA|1|f(12) 3FHT|1|C, 3SQX|1|B, 3I61|1|B, 2DB3|1|E, 3I62|1|B, 2DB3|1|F, 3FHT|1|D, 3I5X|1|B, 3SQW|1|B, 2DB3|1|G, 2DB3|1|H, 3I5Y|1|B(0)
NR_all_79924.1NR_2.0_51156.12.46(1) 3SQW|1|B(29) 2DB3|1|H, 4NIA|1|s, 4NIA|1|j, 4OQ9|1|s, 3FHT|1|D, 4OQ9|1|j, 4NIA|1|l, 3I5Y|1|B, 4OQ9|1|l, 2DB3|1|E, 4NIA|1|p, 3I62|1|B, 4OQ9|1|p, 2DB3|1|G, 4NIA|1|r, 4NIA|1|f, 4OQ9|1|r, 3FHT|1|C, 4OQ9|1|f, 4NIA|1|k, 3I5X|1|B, 4OQ9|1|k, 4NIA|1|o, 3I61|1|B, 4OQ9|1|o, 2DB3|1|F, 4NIA|1|q, 3SQX|1|B, 4OQ9|1|q(0)
NR_all_79924.1NR_2.0_51748.12.46(2) 3I62|1|B, 3I5X|1|B(28) 4OQ9|1|r, 3I5Y|1|B, 4OQ9|1|l, 4NIA|1|f, 4OQ9|1|f, 4NIA|1|p, 2DB3|1|H, 3SQW|1|B, 4OQ9|1|p, 4NIA|1|k, 4OQ9|1|k, 2DB3|1|F, 4NIA|1|r, 3FHT|1|D, 4NIA|1|o, 4OQ9|1|o, 3I61|1|B, 4NIA|1|q, 2DB3|1|E, 4OQ9|1|q, 3SQX|1|B, 4NIA|1|s, 2DB3|1|G, 4OQ9|1|s, 4NIA|1|j, 4OQ9|1|j, 3FHT|1|C, 4NIA|1|l(0)
NR_all_79924.1NR_2.5_15144.12.46(1) 3FHT|1|D(29) 4NIA|1|l, 3I61|1|B, 4OQ9|1|l, 2DB3|1|E, 4NIA|1|p, 3SQW|1|B, 4OQ9|1|p, 2DB3|1|G, 4NIA|1|r, 4NIA|1|f, 4OQ9|1|r, 3FHT|1|C, 4OQ9|1|f, 4NIA|1|k, 3I5Y|1|B, 4OQ9|1|k, 4NIA|1|o, 3I62|1|B, 4OQ9|1|o, 2DB3|1|F, 4NIA|1|q, 3SQX|1|B, 4OQ9|1|q, 2DB3|1|H, 4NIA|1|s, 4NIA|1|j, 4OQ9|1|s, 3I5X|1|B, 4OQ9|1|j(0)
NR_all_79924.1NR_2.5_51111.12.46(18) 4OQ9|1|p, 4NIA|1|q, 4OQ9|1|q, 4NIA|1|r, 4NIA|1|f, 4OQ9|1|r, 4NIA|1|s, 4NIA|1|j, 4OQ9|1|j, 4NIA|1|k, 4OQ9|1|k, 4NIA|1|o, 4OQ9|1|l, 4OQ9|1|o, 4NIA|1|p, 4OQ9|1|s, 4OQ9|1|f, 4NIA|1|l(12) 2DB3|1|E, 3FHT|1|C, 2DB3|1|F, 3I61|1|B, 3FHT|1|D, 3I62|1|B, 3SQW|1|B, 2DB3|1|G, 3I5X|1|B, 2DB3|1|H, 3I5Y|1|B, 3SQX|1|B(0)
NR_all_79924.1NR_2.5_51156.12.46(2) 3SQX|1|B, 3SQW|1|B(28) 4OQ9|1|s, 2DB3|1|E, 4NIA|1|q, 3FHT|1|C, 4OQ9|1|j, 3I62|1|B, 4OQ9|1|q, 4NIA|1|l, 2DB3|1|G, 4NIA|1|s, 3I5X|1|B, 4OQ9|1|l, 4NIA|1|j, 4NIA|1|p, 3I61|1|B, 4OQ9|1|p, 2DB3|1|F, 4NIA|1|r, 4NIA|1|f, 4OQ9|1|r, 2DB3|1|H, 4NIA|1|k, 4OQ9|1|f, 3FHT|1|D, 4OQ9|1|k, 4NIA|1|o, 3I5Y|1|B, 4OQ9|1|o(0)
NR_all_79924.1NR_2.5_51748.12.46(4) 3I62|1|B, 3I5X|1|B, 3I5Y|1|B, 3I61|1|B(26) 4OQ9|1|f, 4NIA|1|r, 3FHT|1|D, 4OQ9|1|o, 4NIA|1|l, 2DB3|1|F, 4NIA|1|k, 4NIA|1|f, 4OQ9|1|r, 4NIA|1|q, 3FHT|1|C, 4OQ9|1|l, 2DB3|1|H, 4OQ9|1|k, 3SQX|1|B, 4OQ9|1|q, 4NIA|1|p, 4NIA|1|o, 2DB3|1|E, 4NIA|1|s, 3SQW|1|B, 4OQ9|1|p, 4NIA|1|j, 4OQ9|1|s, 2DB3|1|G, 4OQ9|1|j(0)
NR_all_79924.1NR_2.5_59612.12.46(4) 2DB3|1|H, 2DB3|1|E, 2DB3|1|F, 2DB3|1|G(26) 3FHT|1|C, 4NIA|1|s, 3SQX|1|B, 4OQ9|1|q, 4NIA|1|p, 3I5Y|1|B, 4OQ9|1|k, 4NIA|1|j, 4OQ9|1|s, 3SQW|1|B, 4OQ9|1|p, 4NIA|1|o, 3I5X|1|B, 4OQ9|1|j, 4NIA|1|r, 3I62|1|B, 4OQ9|1|o, 4NIA|1|l, 4NIA|1|f, 4OQ9|1|r, 4NIA|1|q, 3I61|1|B, 4OQ9|1|l, 3FHT|1|D, 4OQ9|1|f, 4NIA|1|k(0)
NR_all_79924.1NR_2.5_80904.12.46(1) 3FHT|1|C(29) 3I5Y|1|B, 4OQ9|1|k, 4NIA|1|o, 3I62|1|B, 4OQ9|1|o, 2DB3|1|F, 4NIA|1|q, 3SQX|1|B, 4OQ9|1|q, 2DB3|1|H, 4NIA|1|s, 4NIA|1|j, 4OQ9|1|s, 3I5X|1|B, 4OQ9|1|j, 4NIA|1|l, 3I61|1|B, 4OQ9|1|l, 2DB3|1|E, 4NIA|1|p, 3SQW|1|B, 4OQ9|1|p, 2DB3|1|G, 4NIA|1|r, 4NIA|1|f, 4OQ9|1|r, 3FHT|1|D, 4OQ9|1|f, 4NIA|1|k(0)
NR_all_79924.1NR_20.0_15144.12.46(1) 3FHT|1|D(29) 3SQW|1|B, 4OQ9|1|p, 2DB3|1|G, 4NIA|1|r, 4NIA|1|f, 4OQ9|1|r, 3FHT|1|C, 4OQ9|1|f, 4NIA|1|k, 3I5Y|1|B, 4OQ9|1|k, 4NIA|1|o, 3I62|1|B, 4OQ9|1|o, 2DB3|1|F, 4NIA|1|q, 3SQX|1|B, 4OQ9|1|q, 2DB3|1|H, 4NIA|1|s, 4NIA|1|j, 4OQ9|1|s, 3I5X|1|B, 4OQ9|1|j, 4NIA|1|l, 3I61|1|B, 4OQ9|1|l, 2DB3|1|E, 4NIA|1|p(0)
NR_all_79924.1NR_20.0_51111.12.46(18) 4OQ9|1|f, 4NIA|1|k, 4OQ9|1|j, 4NIA|1|l, 4OQ9|1|l, 4NIA|1|p, 4OQ9|1|o, 4NIA|1|q, 4OQ9|1|p, 4NIA|1|r, 4OQ9|1|r, 4NIA|1|j, 4OQ9|1|s, 4OQ9|1|k, 4NIA|1|o, 4OQ9|1|q, 4NIA|1|s, 4NIA|1|f(12) 3I5Y|1|B, 3FHT|1|C, 3SQX|1|B, 3I61|1|B, 2DB3|1|H, 2DB3|1|E, 3I62|1|B, 2DB3|1|F, 3FHT|1|D, 2DB3|1|G, 3I5X|1|B, 3SQW|1|B(0)
NR_all_79924.1NR_20.0_51156.12.46(2) 3SQW|1|B, 3SQX|1|B(28) 4NIA|1|j, 4OQ9|1|s, 4NIA|1|p, 3FHT|1|C, 4OQ9|1|j, 3I61|1|B, 4OQ9|1|p, 4NIA|1|l, 2DB3|1|F, 4NIA|1|r, 3I5X|1|B, 4OQ9|1|l, 4NIA|1|f, 4OQ9|1|r, 2DB3|1|H, 4OQ9|1|f, 4NIA|1|k, 3FHT|1|D, 4OQ9|1|k, 4NIA|1|o, 3I5Y|1|B, 4OQ9|1|o, 2DB3|1|E, 4NIA|1|q, 3I62|1|B, 4OQ9|1|q, 2DB3|1|G, 4NIA|1|s(0)
NR_all_79924.1NR_20.0_51748.12.46(4) 3I5Y|1|B, 3I61|1|B, 3I62|1|B, 3I5X|1|B(26) 4NIA|1|s, 3SQW|1|B, 4OQ9|1|p, 4NIA|1|o, 2DB3|1|H, 4OQ9|1|k, 4OQ9|1|s, 4NIA|1|r, 3FHT|1|D, 4OQ9|1|o, 2DB3|1|G, 4NIA|1|j, 4OQ9|1|j, 4NIA|1|f, 4OQ9|1|r, 4NIA|1|q, 2DB3|1|F, 4OQ9|1|f, 3SQX|1|B, 4OQ9|1|q, 4NIA|1|l, 4OQ9|1|l, 4NIA|1|k, 2DB3|1|E, 3FHT|1|C, 4NIA|1|p(0)
NR_all_79924.1NR_20.0_59612.12.46(4) 2DB3|1|F, 2DB3|1|G, 2DB3|1|H, 2DB3|1|E(26) 4NIA|1|f, 4OQ9|1|r, 4NIA|1|q, 3I61|1|B, 4OQ9|1|l, 3I5X|1|B, 4OQ9|1|j, 4OQ9|1|f, 3SQX|1|B, 4OQ9|1|q, 4NIA|1|p, 4NIA|1|l, 3FHT|1|D, 4NIA|1|k, 3FHT|1|C, 4NIA|1|s, 3SQW|1|B, 4OQ9|1|p, 4OQ9|1|k, 4NIA|1|j, 4OQ9|1|s, 4NIA|1|r, 3I5Y|1|B, 4NIA|1|o, 4OQ9|1|o, 3I62|1|B(0)
NR_all_79924.1NR_20.0_80904.12.46(1) 3FHT|1|C(29) 3SQX|1|B, 4NIA|1|q, 2DB3|1|H, 4OQ9|1|q, 4NIA|1|j, 4NIA|1|s, 4OQ9|1|s, 3I5X|1|B, 4NIA|1|l, 4OQ9|1|j, 3I61|1|B, 2DB3|1|E, 4OQ9|1|l, 3SQW|1|B, 4NIA|1|p, 2DB3|1|G, 4OQ9|1|p, 4NIA|1|f, 4NIA|1|r, 3FHT|1|D, 4OQ9|1|r, 4NIA|1|k, 4OQ9|1|f, 3I5Y|1|B, 4OQ9|1|k, 3I62|1|B, 4NIA|1|o, 2DB3|1|F, 4OQ9|1|o(0)
NR_all_79924.1NR_3.0_15144.12.46(1) 3FHT|1|D(29) 3FHT|1|C, 4OQ9|1|f, 4NIA|1|k, 3I5Y|1|B, 4OQ9|1|k, 4NIA|1|o, 3I62|1|B, 4OQ9|1|o, 2DB3|1|F, 4NIA|1|q, 3SQX|1|B, 4OQ9|1|q, 2DB3|1|H, 4NIA|1|s, 4NIA|1|j, 4OQ9|1|s, 3I5X|1|B, 4OQ9|1|j, 4NIA|1|l, 3I61|1|B, 4OQ9|1|l, 2DB3|1|E, 4NIA|1|p, 3SQW|1|B, 4OQ9|1|p, 2DB3|1|G, 4NIA|1|r, 4NIA|1|f, 4OQ9|1|r(0)
NR_all_79924.1NR_3.0_51111.12.46(18) 4NIA|1|p, 4OQ9|1|p, 4NIA|1|r, 4OQ9|1|q, 4NIA|1|s, 4NIA|1|f, 4OQ9|1|s, 4OQ9|1|f, 4NIA|1|j, 4OQ9|1|k, 4NIA|1|l, 4NIA|1|o, 4OQ9|1|o, 4NIA|1|q, 4OQ9|1|r, 4OQ9|1|j, 4NIA|1|k, 4OQ9|1|l(12) 3SQX|1|B, 3I5X|1|B, 2DB3|1|H, 3SQW|1|B, 3I5Y|1|B, 2DB3|1|G, 3I61|1|B, 2DB3|1|E, 3FHT|1|C, 2DB3|1|F, 3FHT|1|D, 3I62|1|B(0)
NR_all_79924.1NR_3.0_51156.12.46(2) 3SQX|1|B, 3SQW|1|B(28) 4OQ9|1|r, 3I5X|1|B, 4OQ9|1|l, 4NIA|1|f, 4NIA|1|p, 2DB3|1|H, 4OQ9|1|f, 3I61|1|B, 4OQ9|1|p, 4NIA|1|k, 2DB3|1|F, 4NIA|1|r, 3FHT|1|D, 4OQ9|1|k, 4NIA|1|o, 3I5Y|1|B, 4OQ9|1|o, 2DB3|1|E, 4NIA|1|q, 4OQ9|1|q, 3I62|1|B, 2DB3|1|G, 4NIA|1|s, 4OQ9|1|s, 4NIA|1|j, 3FHT|1|C, 4OQ9|1|j, 4NIA|1|l(0)
NR_all_79924.1NR_3.0_51748.12.46(4) 3I62|1|B, 3I5X|1|B, 3I5Y|1|B, 3I61|1|B(26) 4OQ9|1|q, 4NIA|1|q, 3FHT|1|C, 4OQ9|1|l, 4NIA|1|k, 3SQX|1|B, 4NIA|1|p, 2DB3|1|H, 4OQ9|1|k, 2DB3|1|E, 4NIA|1|s, 4OQ9|1|s, 3SQW|1|B, 4OQ9|1|p, 4NIA|1|o, 4NIA|1|j, 4OQ9|1|j, 4NIA|1|r, 3FHT|1|D, 2DB3|1|G, 4NIA|1|f, 4OQ9|1|r, 4OQ9|1|o, 4NIA|1|l, 2DB3|1|F, 4OQ9|1|f(0)
NR_all_79924.1NR_3.0_59612.12.46(4) 2DB3|1|H, 2DB3|1|E, 2DB3|1|F, 2DB3|1|G(26) 4NIA|1|r, 4NIA|1|p, 3I5Y|1|B, 4OQ9|1|k, 4NIA|1|j, 4OQ9|1|s, 4OQ9|1|r, 3SQW|1|B, 4OQ9|1|p, 4NIA|1|o, 3I5X|1|B, 4OQ9|1|j, 4NIA|1|f, 4OQ9|1|f, 3I62|1|B, 4OQ9|1|o, 4NIA|1|l, 3FHT|1|D, 4NIA|1|q, 3I61|1|B, 4OQ9|1|l, 4NIA|1|k, 3SQX|1|B, 4OQ9|1|q, 3FHT|1|C, 4NIA|1|s(0)
NR_all_79924.1NR_3.0_80904.12.46(1) 3FHT|1|C(29) 3I5X|1|B, 4OQ9|1|j, 4NIA|1|l, 3I61|1|B, 4OQ9|1|l, 2DB3|1|E, 4NIA|1|p, 3SQW|1|B, 4OQ9|1|p, 2DB3|1|G, 4NIA|1|r, 4NIA|1|f, 4OQ9|1|r, 3FHT|1|D, 4OQ9|1|f, 4NIA|1|k, 3I5Y|1|B, 4OQ9|1|k, 4NIA|1|o, 3I62|1|B, 4OQ9|1|o, 2DB3|1|F, 4NIA|1|q, 3SQX|1|B, 4OQ9|1|q, 2DB3|1|H, 4NIA|1|s, 4NIA|1|j, 4OQ9|1|s(0)
NR_all_79924.1NR_3.5_15144.12.46(1) 3FHT|1|D(29) 3I62|1|B, 4OQ9|1|o, 2DB3|1|F, 4NIA|1|q, 3SQX|1|B, 4OQ9|1|q, 2DB3|1|H, 4NIA|1|s, 4NIA|1|j, 4OQ9|1|s, 3I5X|1|B, 4OQ9|1|j, 4NIA|1|l, 3I61|1|B, 4OQ9|1|l, 2DB3|1|E, 4NIA|1|p, 3SQW|1|B, 4OQ9|1|p, 2DB3|1|G, 4NIA|1|r, 4NIA|1|f, 4OQ9|1|r, 3FHT|1|C, 4OQ9|1|f, 4NIA|1|k, 3I5Y|1|B, 4OQ9|1|k, 4NIA|1|o(0)
NR_all_79924.1NR_3.5_51111.12.46(18) 4OQ9|1|j, 4NIA|1|k, 4OQ9|1|l, 4NIA|1|o, 4OQ9|1|o, 4NIA|1|p, 4OQ9|1|p, 4NIA|1|q, 4OQ9|1|r, 4NIA|1|s, 4NIA|1|f, 4OQ9|1|f, 4NIA|1|j, 4OQ9|1|k, 4NIA|1|l, 4OQ9|1|q, 4NIA|1|r, 4OQ9|1|s(12) 3SQW|1|B, 2DB3|1|G, 3I5X|1|B, 3I62|1|B, 2DB3|1|H, 3I5Y|1|B, 3SQX|1|B, 2DB3|1|E, 3FHT|1|C, 3I61|1|B, 3FHT|1|D, 2DB3|1|F(0)
NR_all_79924.1NR_3.5_51156.12.46(2) 3SQW|1|B, 3SQX|1|B(28) 4NIA|1|r, 3FHT|1|D, 4OQ9|1|k, 2DB3|1|F, 4NIA|1|f, 4OQ9|1|r, 4NIA|1|o, 4OQ9|1|f, 3I5Y|1|B, 4OQ9|1|o, 2DB3|1|H, 4NIA|1|k, 2DB3|1|E, 4NIA|1|q, 3I62|1|B, 4OQ9|1|q, 2DB3|1|G, 4NIA|1|s, 4NIA|1|j, 4OQ9|1|s, 3FHT|1|C, 4OQ9|1|j, 4NIA|1|l, 3I5X|1|B, 4OQ9|1|l, 4NIA|1|p, 3I61|1|B, 4OQ9|1|p(0)
NR_all_79924.1NR_3.5_51748.12.46(4) 3I61|1|B, 3I62|1|B, 3I5X|1|B, 3I5Y|1|B(26) 3FHT|1|D, 4OQ9|1|o, 4NIA|1|l, 4NIA|1|j, 4OQ9|1|s, 4NIA|1|r, 4NIA|1|q, 3FHT|1|C, 4OQ9|1|l, 2DB3|1|G, 4OQ9|1|j, 4NIA|1|f, 4OQ9|1|r, 3SQX|1|B, 4OQ9|1|q, 4NIA|1|p, 2DB3|1|F, 4OQ9|1|f, 4NIA|1|s, 3SQW|1|B, 4OQ9|1|p, 4NIA|1|k, 2DB3|1|E, 2DB3|1|H, 4OQ9|1|k, 4NIA|1|o(0)
NR_all_79924.1NR_3.5_59612.12.46(4) 2DB3|1|G, 2DB3|1|H, 2DB3|1|E, 2DB3|1|F(26) 3I61|1|B, 4OQ9|1|l, 4NIA|1|k, 3FHT|1|D, 4OQ9|1|r, 4NIA|1|q, 4OQ9|1|q, 4NIA|1|p, 3I5Y|1|B, 4OQ9|1|k, 4OQ9|1|f, 3SQX|1|B, 3SQW|1|B, 4OQ9|1|p, 4NIA|1|o, 3FHT|1|C, 4NIA|1|s, 4OQ9|1|s, 4NIA|1|r, 3I62|1|B, 4OQ9|1|o, 4NIA|1|j, 4NIA|1|f, 3I5X|1|B, 4OQ9|1|j, 4NIA|1|l(0)
NR_all_79924.1NR_3.5_80904.12.46(1) 3FHT|1|C(29) 2DB3|1|E, 4NIA|1|p, 3SQW|1|B, 4OQ9|1|p, 2DB3|1|G, 4NIA|1|r, 4NIA|1|f, 4OQ9|1|r, 3FHT|1|D, 4OQ9|1|f, 4NIA|1|k, 3I5Y|1|B, 4OQ9|1|k, 4NIA|1|o, 3I62|1|B, 4OQ9|1|o, 2DB3|1|F, 4NIA|1|q, 3SQX|1|B, 4OQ9|1|q, 2DB3|1|H, 4NIA|1|s, 4NIA|1|j, 4OQ9|1|s, 3I5X|1|B, 4OQ9|1|j, 4NIA|1|l, 3I61|1|B, 4OQ9|1|l(0)
NR_all_79924.1NR_4.0_15144.12.46(1) 3FHT|1|D(29) 4NIA|1|s, 2DB3|1|H, 4OQ9|1|s, 4NIA|1|j, 4OQ9|1|j, 3I5X|1|B, 4NIA|1|l, 4OQ9|1|l, 3I61|1|B, 4NIA|1|p, 2DB3|1|E, 4OQ9|1|p, 3SQW|1|B, 4NIA|1|r, 2DB3|1|G, 4OQ9|1|r, 4NIA|1|f, 4OQ9|1|f, 3FHT|1|C, 4NIA|1|k, 4OQ9|1|k, 3I5Y|1|B, 4NIA|1|o, 4OQ9|1|o, 3I62|1|B, 4NIA|1|q, 2DB3|1|F, 4OQ9|1|q, 3SQX|1|B(0)
NR_all_79924.1NR_4.0_51111.12.46(18) 4OQ9|1|q, 4NIA|1|r, 4NIA|1|f, 4OQ9|1|s, 4OQ9|1|f, 4NIA|1|j, 4OQ9|1|j, 4NIA|1|l, 4OQ9|1|k, 4OQ9|1|o, 4NIA|1|p, 4OQ9|1|p, 4NIA|1|q, 4OQ9|1|r, 4NIA|1|s, 4NIA|1|k, 4OQ9|1|l, 4NIA|1|o(12) 3I62|1|B, 3I5X|1|B, 2DB3|1|F, 3SQW|1|B, 3FHT|1|D, 2DB3|1|G, 2DB3|1|H, 3I5Y|1|B, 3SQX|1|B, 3I61|1|B, 2DB3|1|E, 3FHT|1|C(0)
NR_all_79924.1NR_4.0_51156.12.46(2) 3SQW|1|B, 3SQX|1|B(28) 3FHT|1|D, 4OQ9|1|k, 2DB3|1|E, 4NIA|1|q, 4NIA|1|o, 3I62|1|B, 4OQ9|1|q, 3I5Y|1|B, 2DB3|1|G, 4NIA|1|s, 4OQ9|1|o, 4NIA|1|j, 4OQ9|1|s, 3FHT|1|C, 4OQ9|1|j, 4NIA|1|l, 3I5X|1|B, 4OQ9|1|l, 4NIA|1|p, 3I61|1|B, 4OQ9|1|p, 2DB3|1|F, 4NIA|1|r, 4NIA|1|f, 4OQ9|1|r, 2DB3|1|H, 4OQ9|1|f, 4NIA|1|k(0)
NR_all_79924.1NR_4.0_51748.12.46(4) 3I5X|1|B, 3I5Y|1|B, 3I61|1|B, 3I62|1|B(26) 4OQ9|1|l, 4NIA|1|k, 2DB3|1|E, 4NIA|1|s, 3SQW|1|B, 4OQ9|1|p, 3FHT|1|C, 4NIA|1|p, 2DB3|1|H, 4OQ9|1|k, 4NIA|1|j, 4OQ9|1|s, 4NIA|1|r, 4NIA|1|o, 2DB3|1|G, 4OQ9|1|j, 4NIA|1|f, 4OQ9|1|r, 3FHT|1|D, 4OQ9|1|o, 4NIA|1|l, 2DB3|1|F, 4OQ9|1|f, 4NIA|1|q, 3SQX|1|B, 4OQ9|1|q(0)
NR_all_79924.1NR_4.0_59612.12.46(4) 2DB3|1|E, 2DB3|1|F, 2DB3|1|G, 2DB3|1|H(26) 4NIA|1|o, 3I5X|1|B, 4OQ9|1|j, 4NIA|1|r, 3I62|1|B, 4OQ9|1|o, 4NIA|1|l, 3FHT|1|D, 4NIA|1|f, 4OQ9|1|r, 4NIA|1|q, 3I61|1|B, 4OQ9|1|l, 4OQ9|1|f, 3SQX|1|B, 4OQ9|1|q, 4NIA|1|p, 3I5Y|1|B, 4NIA|1|k, 3FHT|1|C, 4NIA|1|s, 3SQW|1|B, 4OQ9|1|p, 4OQ9|1|k, 4NIA|1|j, 4OQ9|1|s(0)
NR_all_79924.1NR_4.0_80904.12.46(1) 3FHT|1|C(29) 4NIA|1|f, 4OQ9|1|r, 3FHT|1|D, 4OQ9|1|f, 4NIA|1|k, 3I5Y|1|B, 4OQ9|1|k, 4NIA|1|o, 3I62|1|B, 4OQ9|1|o, 2DB3|1|F, 4NIA|1|q, 3SQX|1|B, 4OQ9|1|q, 2DB3|1|H, 4NIA|1|s, 4NIA|1|j, 4OQ9|1|s, 3I5X|1|B, 4OQ9|1|j, 4NIA|1|l, 3I61|1|B, 4OQ9|1|l, 2DB3|1|E, 4NIA|1|p, 3SQW|1|B, 4OQ9|1|p, 2DB3|1|G, 4NIA|1|r(0)
NR_all_79924.1NR_all_15144.12.46(1) 3FHT|1|D(29) 4NIA|1|l, 3I61|1|B, 4OQ9|1|l, 2DB3|1|E, 4NIA|1|p, 3SQW|1|B, 4OQ9|1|p, 2DB3|1|G, 4NIA|1|r, 4NIA|1|f, 4OQ9|1|r, 3FHT|1|C, 4OQ9|1|f, 4NIA|1|k, 3I5Y|1|B, 4OQ9|1|k, 4NIA|1|o, 3I62|1|B, 4OQ9|1|o, 2DB3|1|F, 4NIA|1|q, 3SQX|1|B, 4OQ9|1|q, 2DB3|1|H, 4NIA|1|s, 4NIA|1|j, 4OQ9|1|s, 3I5X|1|B, 4OQ9|1|j(0)
NR_all_79924.1NR_all_51111.12.46(18) 4NIA|1|o, 4OQ9|1|l, 4NIA|1|p, 4OQ9|1|p, 4NIA|1|q, 4OQ9|1|q, 4NIA|1|f, 4OQ9|1|r, 4NIA|1|s, 4NIA|1|j, 4OQ9|1|j, 4NIA|1|k, 4OQ9|1|k, 4NIA|1|l, 4OQ9|1|o, 4OQ9|1|s, 4OQ9|1|f, 4NIA|1|r(12) 2DB3|1|F, 3I61|1|B, 3FHT|1|D, 2DB3|1|E, 3I62|1|B, 3FHT|1|C, 3I5X|1|B, 3SQW|1|B, 2DB3|1|G, 2DB3|1|H, 3I5Y|1|B, 3SQX|1|B(0)
NR_all_79924.1NR_all_51156.12.46(2) 3SQX|1|B, 3SQW|1|B(28) 3FHT|1|C, 4OQ9|1|j, 2DB3|1|E, 4NIA|1|q, 4OQ9|1|q, 4NIA|1|l, 3I62|1|B, 3I5X|1|B, 4OQ9|1|l, 2DB3|1|G, 4NIA|1|s, 4OQ9|1|s, 4NIA|1|p, 4NIA|1|j, 3I61|1|B, 4OQ9|1|p, 2DB3|1|F, 4NIA|1|r, 4NIA|1|f, 4OQ9|1|r, 2DB3|1|H, 4OQ9|1|f, 4NIA|1|k, 3FHT|1|D, 4OQ9|1|k, 4NIA|1|o, 3I5Y|1|B, 4OQ9|1|o(0)
NR_all_79924.1NR_all_51748.12.46(4) 3I62|1|B, 3I5X|1|B, 3I5Y|1|B, 3I61|1|B(26) 2DB3|1|F, 4OQ9|1|f, 4NIA|1|f, 4NIA|1|r, 3FHT|1|D, 4OQ9|1|o, 4NIA|1|l, 4OQ9|1|l, 4NIA|1|k, 4OQ9|1|r, 4NIA|1|q, 3FHT|1|C, 2DB3|1|H, 4OQ9|1|k, 3SQX|1|B, 4OQ9|1|q, 4NIA|1|p, 4OQ9|1|p, 4NIA|1|o, 2DB3|1|E, 4NIA|1|s, 3SQW|1|B, 4NIA|1|j, 4OQ9|1|s, 2DB3|1|G, 4OQ9|1|j(0)
NR_all_79924.1NR_all_59612.12.46(4) 2DB3|1|G, 2DB3|1|H, 2DB3|1|E, 2DB3|1|F(26) 4OQ9|1|k, 4NIA|1|j, 3SQX|1|B, 4OQ9|1|q, 4NIA|1|p, 3I5Y|1|B, 4NIA|1|o, 3I5X|1|B, 4OQ9|1|j, 3FHT|1|C, 4OQ9|1|s, 4NIA|1|s, 3SQW|1|B, 4OQ9|1|p, 4OQ9|1|o, 4NIA|1|l, 4NIA|1|r, 3I62|1|B, 4NIA|1|q, 3I61|1|B, 4OQ9|1|l, 4NIA|1|f, 4OQ9|1|r, 3FHT|1|D, 4OQ9|1|f, 4NIA|1|k(0)
NR_all_79924.1NR_all_80904.12.46(1) 3FHT|1|C(29) 3I5Y|1|B, 4OQ9|1|k, 4NIA|1|o, 3I62|1|B, 4OQ9|1|o, 2DB3|1|F, 4NIA|1|q, 3SQX|1|B, 4OQ9|1|q, 2DB3|1|H, 4NIA|1|s, 4NIA|1|j, 4OQ9|1|s, 3I5X|1|B, 4OQ9|1|j, 4NIA|1|l, 3I61|1|B, 4OQ9|1|l, 2DB3|1|E, 4NIA|1|p, 3SQW|1|B, 4OQ9|1|p, 2DB3|1|G, 4NIA|1|r, 4NIA|1|f, 4OQ9|1|r, 3FHT|1|D, 4OQ9|1|f, 4NIA|1|k(0)

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
13I5Y|1|BStructure of Mss116p bound to ssRNA containing a single 5-BrU and AMP-PNPX-RAY DIFFRACTION2.499
23I62|1|BStructure of Mss116p bound to ssRNA and ADP-Aluminum FluorideX-RAY DIFFRACTION1.9510
33I61|1|BStructure of Mss116p bound to ssRNA and ADP-Beryllium FluorideX-RAY DIFFRACTION2.110
43I5X|1|BStructure of Mss116p bound to ssRNA and AMP-PNPX-RAY DIFFRACTION1.910
54OQ9|1|sSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.4510
64OQ9|1|pSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.4510
74OQ9|1|qSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.4510
84OQ9|1|rSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.4510
94OQ9|1|oSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.4510
104OQ9|1|lSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.4510
114OQ9|1|jSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.4510
124OQ9|1|kSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.4510
134OQ9|1|fSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.4510
144NIA|1|pSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.8210
154NIA|1|kSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.8210
164NIA|1|jSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.8210
174NIA|1|fSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.8210
184NIA|1|rSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.8210
194NIA|1|lSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.8210
204NIA|1|sSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.8210
214NIA|1|oSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.8210
224NIA|1|qSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.8210
233SQX|1|BStructure of Mss116p (NTE and C-tail double deletion) bound to ssRNA and AMP-PNPX-RAY DIFFRACTION2.118
243SQW|1|BStructure of Mss116p (NTE deletion) bound to ssRNA and AMP-PNPX-RAY DIFFRACTION1.918
252DB3|1|FStructural basis for RNA unwinding by the DEAD-box protein Drosophila VasaX-RAY DIFFRACTION2.27
262DB3|1|GStructural basis for RNA unwinding by the DEAD-box protein Drosophila VasaX-RAY DIFFRACTION2.27
272DB3|1|EStructural basis for RNA unwinding by the DEAD-box protein Drosophila VasaX-RAY DIFFRACTION2.27
282DB3|1|HStructural basis for RNA unwinding by the DEAD-box protein Drosophila VasaX-RAY DIFFRACTION2.26
293FHT|1|DCrystal structure of human Dbp5 in complex with AMPPNP and RNAX-RAY DIFFRACTION2.26
303FHT|1|CCrystal structure of human Dbp5 in complex with AMPPNP and RNAX-RAY DIFFRACTION2.26
Copyright 2023 BGSU RNA group. Page generated in 0.0068 s