#IFECompound(s)RNA source organismTitleMethodResolutionDate
16N6C|1|D (rep)RNA (5'-R(P*AP*A)-3')synthetic constructVibrio cholerae Oligoribonuclease bound to pAAX-RAY DIFFRACTION1.622019-06-12
26N6J|1|CRNA (5'-R(P*AP*A)-3')synthetic constructHuman REXO2 bound to pAAX-RAY DIFFRACTION1.322019-06-12
36N6J|1|DRNA (5'-R(P*AP*A)-3')synthetic constructHuman REXO2 bound to pAAX-RAY DIFFRACTION1.322019-06-12
46P7Q|1|ERNA (5'-R(P*AP*A)-3')Escherichia coliStructure of E. coli MS115-1 NucC, 5'-pApA bound formX-RAY DIFFRACTION1.662019-12-25
56P7Q|1|FRNA (5'-R(P*AP*A)-3')Escherichia coliStructure of E. coli MS115-1 NucC, 5'-pApA bound formX-RAY DIFFRACTION1.662019-12-25
66P7Q|1|DRNA (5'-R(P*AP*A)-3')Escherichia coliStructure of E. coli MS115-1 NucC, 5'-pApA bound formX-RAY DIFFRACTION1.662019-12-25
76RCL|1|CRNA (5'-R(P*AP*A)-3')synthetic constructCrystal structure of REXO2-D199A-AAX-RAY DIFFRACTION1.972019-10-09
85JJU|1|CRNA (5'-R(P*AP*A)-3')synthetic constructCrystal structure of Rv2837c complexed with 5'-pApA and 5'-AMPX-RAY DIFFRACTION2.312016-05-04
94EJT|1|G5'-R(*AP*A)-3'Staphylococcus epidermidis TcaR in complex with RNAX-RAY DIFFRACTION32013-06-05
105CEU|1|CRNA (5'-R(P*AP*A)-3')Crystal structure of Rv2837c complexed with 5'-pApAX-RAY DIFFRACTION2.362015-12-23
115CEU|1|DRNA (5'-R(P*AP*A)-3')Crystal structure of Rv2837c complexed with 5'-pApAX-RAY DIFFRACTION2.362015-12-23
123J0O|1|wmRNA fragmentOryctolagus cuniculusCore of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 9A cryo-EM map: classic PRE state 2ELECTRON MICROSCOPY92011-11-16
133J0L|1|wmRNA fragmentOryctolagus cuniculusCore of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 9.8A cryo-EM map: classic PRE state 1ELECTRON MICROSCOPY9.82011-11-16
143J0Q|1|wmRNA fragmentOryctolagus cuniculusCore of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 10.6A cryo-em map: rotated PRE state 2ELECTRON MICROSCOPY10.62011-11-16
153J0P|1|wmRNA fragmentOryctolagus cuniculusCore of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 10.6A cryo-em map: rotated PRE state 1ELECTRON MICROSCOPY10.62011-11-16

Release history

Release3.1063.1073.108
Date2020-01-012020-01-022020-01-08

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_80570.9NR_all_80570.83.106(12) 6N6C|1|D, 5JJU|1|C, 5CEU|1|D, 5CEU|1|C, 4EJT|1|G, 3J0Q|1|w, 3J0P|1|w, 3J0O|1|w, 6RCL|1|C, 3J0L|1|w, 6N6J|1|D, 6N6J|1|C(3) 6P7Q|1|D, 6P7Q|1|F, 6P7Q|1|E(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16P7Q|1|DStructure of E. coli MS115-1 NucC, 5'-pApA bound formX-RAY DIFFRACTION1.662
26RCL|1|CCrystal structure of REXO2-D199A-AAX-RAY DIFFRACTION1.972
33J0L|1|wCore of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 9.8A cryo-EM map: classic PRE state 1ELECTRON MICROSCOPY9.82
43J0P|1|wCore of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 10.6A cryo-em map: rotated PRE state 1ELECTRON MICROSCOPY10.62
53J0O|1|wCore of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 9A cryo-EM map: classic PRE state 2ELECTRON MICROSCOPY92
63J0Q|1|wCore of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 10.6A cryo-em map: rotated PRE state 2ELECTRON MICROSCOPY10.62
74EJT|1|GStaphylococcus epidermidis TcaR in complex with RNAX-RAY DIFFRACTION32
85CEU|1|CCrystal structure of Rv2837c complexed with 5'-pApAX-RAY DIFFRACTION2.362
95JJU|1|CCrystal structure of Rv2837c complexed with 5'-pApA and 5'-AMPX-RAY DIFFRACTION2.312
105CEU|1|DCrystal structure of Rv2837c complexed with 5'-pApAX-RAY DIFFRACTION2.362
116N6J|1|DHuman REXO2 bound to pAAX-RAY DIFFRACTION1.323
126P7Q|1|FStructure of E. coli MS115-1 NucC, 5'-pApA bound formX-RAY DIFFRACTION1.662
136P7Q|1|EStructure of E. coli MS115-1 NucC, 5'-pApA bound formX-RAY DIFFRACTION1.662
146N6C|1|DVibrio cholerae Oligoribonuclease bound to pAAX-RAY DIFFRACTION1.622
156N6J|1|CHuman REXO2 bound to pAAX-RAY DIFFRACTION1.323