Equivalence class NR_all_84026.2 Current
| # | IFE | Compound(s) | RNA source organism | Title | Method | Resolution | Date |
|---|---|---|---|---|---|---|---|
| 1 | 5DHB|1|A+ 5DHB|1|B (rep) | RNA (5'-R(*(LCC)P*(TLN)P*(LCG)P*UP*AP*CP*A)-3') | Cooperativity and Downstream Binding in RNA Replication | X-RAY DIFFRACTION | 1.8 | 2016-12-07 | |
| 2 | 5DHB|1|C+ 5DHB|1|D | RNA (5'-R(*(LCC)P*(TLN)P*(LCG)P*UP*AP*CP*A)-3') | Cooperativity and Downstream Binding in RNA Replication | X-RAY DIFFRACTION | 1.8 | 2016-12-07 | |
| 3 | 5HBW|1|A+ 5HBW|1|B | RNA (5'-R(*(LCC)P*(TLN)P*(LCG)P*UP*AP*CP*A)-3') | RNA primer-template complex with 2-methylimidazole-activated monomer analogue | X-RAY DIFFRACTION | 1.9 | 2016-12-07 | |
| 4 | 6U89|1|A+ 6U89|1|B | RNA (5'-R(*(LCC)P*(TLN)P*(LCG)P*UP*AP*CP*A)-3') | RNA duplex, bound with TNA monomer | X-RAY DIFFRACTION | 2.36 | 2020-12-09 |
Release history
| Release | 3.156 |
|---|---|
| Date | 2020-12-09 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_all_84026.2 | NR_all_84026.1 | 3.156 | (3) 5HBW|1|A+5HBW|1|B, 5DHB|1|C+5DHB|1|D, 5DHB|1|A+5DHB|1|B | (1) 6U89|1|A+6U89|1|B | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 5DHB|1|C+5DHB|1|D | Cooperativity and Downstream Binding in RNA Replication | X-RAY DIFFRACTION | 1.8 | 4 |
| 2 | 6U89|1|A+6U89|1|B | RNA duplex, bound with TNA monomer | X-RAY DIFFRACTION | 2.36 | 4 |
| 3 | 5HBW|1|A+5HBW|1|B | RNA primer-template complex with 2-methylimidazole-activated monomer analogue | X-RAY DIFFRACTION | 1.9 | 4 |
| 4 | 5DHB|1|A+5DHB|1|B | Cooperativity and Downstream Binding in RNA Replication | X-RAY DIFFRACTION | 1.8 | 4 |