#PDBTitleRNA source organismCompoundsMethodResolutionDate
13UCZ|R (rep)The c-di-GMP-I riboswitch bound to GpGRNA (5'-R(*GP*G)-3'), U1 small nuclear ribonucleoprotein A, RNA (92-MER)X-RAY DIFFRACTION2.82012-01-04
23IRW|RStructure of a c-di-GMP riboswitch from V. choleraeVibrio choleraeU1 small nuclear ribonucleoprotein A, c-di-GMP RiboswitchX-RAY DIFFRACTION2.72009-11-10
33MUM|RCrystal Structure of the G20A mutant c-di-GMP riboswith bound to c-di-GMPU1 small nuclear ribonucleoprotein A, G20A mutant c-di-GMP RiboswitchX-RAY DIFFRACTION2.92010-08-25
43MUR|RCrystal Structure of the C92U mutant c-di-GMP riboswith bound to c-di-GMPU1 small nuclear ribonucleoprotein A, C92U mutant c-di-GMP riboswitchX-RAY DIFFRACTION32010-08-25
53MUT|RCrystal Structure of the G20A/C92U mutant c-di-GMP riboswith bound to c-di-GMPU1 small nuclear ribonucleoprotein A, G20A/C92U mutant c-di-GMP riboswitchX-RAY DIFFRACTION32010-08-25
63MUV|RCrystal Structure of the G20A/C92U mutant c-di-GMP riboswith bound to c-di-AMPU1 small nuclear ribonucleoprotein A, G20A/C92U mutant c-di-GMP riboswitchX-RAY DIFFRACTION3.22010-08-25
73MXH|RNative structure of a c-di-GMP riboswitch from V. choleraeU1 small nuclear ribonucleoprotein A, c-di-GMP riboswitchX-RAY DIFFRACTION2.32010-08-25
83UCU|RThe c-di-GMP-I riboswitch bound to pGpGdiguanosine monophosphate, U1 small nuclear ribonucleoprotein A, RNA (92-MER)X-RAY DIFFRACTION2.82012-01-04
93UD3|RThe C92U mutant c-di-GMP-I riboswitch bound to pGpARNA (5'-R(P*GP*A)-3'), U1 small nuclear ribonucleoprotein A, RNA (92-MER)X-RAY DIFFRACTION3.12012-01-04
103UD4|RThe C92U mutant c-di-GMP-I riboswitch bound to GpARNA (5'-R(*GP*A)-3'), U1 small nuclear ribonucleoprotein A, RNA (92-MER)X-RAY DIFFRACTION2.72012-01-04

Release history

Release0.510.520.530.540.550.560.570.580.590.600.610.620.630.640.650.660.670.680.690.700.710.720.730.740.750.760.770.780.790.800.810.820.830.840.850.860.870.880.890.900.910.920.930.940.950.960.970.980.990.1000.1010.1020.1030.1040.1050.1060.1070.1080.1090.1101.01.11.21.31.41.51.61.71.81.91.101.111.121.131.141.151.161.171.181.191.201.211.221.231.241.251.261.271.281.291.301.311.321.331.341.351.361.371.381.391.401.411.421.431.441.451.461.471.481.491.501.511.521.531.541.551.561.571.581.591.601.611.621.631.641.651.661.671.681.691.701.711.721.731.741.751.761.771.781.791.801.811.821.831.841.851.861.871.881.89
Date2012-01-072012-01-142012-01-212012-01-282012-02-042012-02-112012-02-182012-02-252012-03-032012-03-102012-03-172012-03-242012-03-312012-04-072012-04-142012-04-212012-04-282012-05-052012-05-122012-05-192012-05-262012-06-022012-06-092012-06-162012-06-232012-06-302012-07-072012-07-142012-07-212012-07-282012-08-042012-08-112012-08-182012-08-252012-09-012012-09-082012-09-152012-09-222012-09-292012-10-062012-10-132012-10-202012-10-272012-11-032012-11-102012-11-172012-11-242012-12-012012-12-082012-12-152012-12-222012-12-292013-01-052013-01-122013-01-192013-01-262013-02-022013-02-092013-02-162013-02-232013-03-022013-03-092013-03-162013-03-232013-03-302013-04-062013-04-132013-04-202013-04-272013-05-042013-05-112013-05-182013-05-252013-06-012013-06-082013-06-152013-06-222013-06-292013-07-062013-07-132013-07-202013-07-272013-08-032013-08-102013-08-172013-08-242013-08-312013-09-072013-09-142013-09-212013-09-282013-10-052013-10-122013-10-192013-10-262013-11-092013-11-162013-11-232013-11-302013-12-072013-12-142013-12-212013-12-282014-01-042014-01-112014-01-182014-01-252014-02-012014-02-082014-02-152014-02-222014-03-012014-03-082014-03-172014-03-222014-03-292014-04-052014-04-122014-04-192014-04-262014-05-032014-05-102014-05-172014-05-312014-06-072014-06-132014-06-202014-06-272014-07-042014-07-182014-07-252014-08-012014-08-082014-08-152014-08-222014-08-292014-09-052014-09-122014-09-192014-09-262014-10-032014-10-102014-10-172014-10-242014-10-312014-11-072014-11-142014-11-212014-11-282014-12-05

Parents

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Children

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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
13MXH|RNative structure of a c-di-GMP riboswitch from V. choleraeX-RAY DIFFRACTION2.392
23MUM|RCrystal Structure of the G20A mutant c-di-GMP riboswith bound to c-di-GMPX-RAY DIFFRACTION2.992
33MUT|RCrystal Structure of the G20A/C92U mutant c-di-GMP riboswith bound to c-di-GMPX-RAY DIFFRACTION392
43MUR|RCrystal Structure of the C92U mutant c-di-GMP riboswith bound to c-di-GMPX-RAY DIFFRACTION392
53UCZ|RThe c-di-GMP-I riboswitch bound to GpGX-RAY DIFFRACTION2.892
63UCU|RThe c-di-GMP-I riboswitch bound to pGpGX-RAY DIFFRACTION2.892
73UD3|RThe C92U mutant c-di-GMP-I riboswitch bound to pGpAX-RAY DIFFRACTION3.192
83UD4|RThe C92U mutant c-di-GMP-I riboswitch bound to GpAX-RAY DIFFRACTION2.792
93IRW|RStructure of a c-di-GMP riboswitch from V. choleraeX-RAY DIFFRACTION2.792
103MUV|RCrystal Structure of the G20A/C92U mutant c-di-GMP riboswith bound to c-di-AMPX-RAY DIFFRACTION3.292