Equivalence class NR_all_87890.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 8B2L|1|h1 (rep) | Small subunit ribosomal RNA | 18S rRNA | Nicotiana tabacum | Eukarya | RF01960 | Cryo-EM structure of the plant 80S ribosome | Electron microscopy | 2.2 | 2023-08-23 |
| 2 | 8AUV|1|h | Small subunit ribosomal RNA | 18S rRNA | Nicotiana tabacum | Eukarya | RF01960 | Cryo-EM structure of the plant 40S subunit | Electron microscopy | 2.38 | 2023-06-07 |
| 3 | 7QIZ|1|S2 | Small subunit ribosomal RNA | 18S | Solanum lycopersicum | Eukarya | RF01960 | Specific features and methylation sites of a plant 80S ribosome | Electron microscopy | 2.38 | 2022-08-03 |
| 4 | 8R6F|1|A | Small subunit ribosomal RNA | RNA (1177-MER) | Triticum aestivum | Eukarya | RF01960 | CryoEM structure of wheat 40S ribosomal subunit, body domain | Electron microscopy | 2.34 | 2023-12-27 |
| 5 | 7QIX|1|2 | Small subunit ribosomal RNA | 18S rRNA body | Solanum lycopersicum | Eukarya | RF01960 | Specific features and methylation sites of a plant ribosome. 40S body ribosomal subunit. | Electron microscopy | 2.53 | 2022-06-15 |
| 6 | 8R57|1|A | Small subunit ribosomal RNA | RNA (458-MER) | Triticum aestivum | Eukarya | RF01960 | CryoEM structure of wheat 40S ribosomal subunit, head domain | Electron microscopy | 2.55 | 2023-12-27 |
| 7 | 4V7E|1|Ad | Small subunit ribosomal RNA | 18S ribosomal RNA | Triticum aestivum | Eukarya | RF01960 | Model of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosome | Electron microscopy | 5.5 | 2014-07-09 |
| 8 | 7QIY|1|2 | Small subunit ribosomal RNA | 18S rRNA head | Solanum lycopersicum | Eukarya | RF01960 | Specific features and methylation sites of a plant ribosome. 40S head ribosomal subunit. | Electron microscopy | 2.58 | 2022-06-15 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 4V7E|1|Ad | Model of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosome | ELECTRON MICROSCOPY | 5.5 | 1762 |
| 2 | 8AUV|1|h | Cryo-EM structure of the plant 40S subunit | ELECTRON MICROSCOPY | 2.38 | 1545 |
| 3 | 8B2L|1|h1 | Cryo-EM structure of the plant 80S ribosome | ELECTRON MICROSCOPY | 2.2 | 1545 |
| 4 | 7QIZ|1|S2 | Specific features and methylation sites of a plant 80S ribosome | ELECTRON MICROSCOPY | 2.38 | 1507 |
| 5 | 7QIX|1|2 | Specific features and methylation sites of a plant ribosome. 40S body ribosomal subunit. | ELECTRON MICROSCOPY | 2.53 | 1060 |
| 6 | 8R6F|1|A | CryoEM structure of wheat 40S ribosomal subunit, body domain | ELECTRON MICROSCOPY | 2.34 | 1122 |
| 7 | 8R57|1|A | CryoEM structure of wheat 40S ribosomal subunit, head domain | ELECTRON MICROSCOPY | 2.55 | 429 |
| 8 | 7QIY|1|2 | Specific features and methylation sites of a plant ribosome. 40S head ribosomal subunit. | ELECTRON MICROSCOPY | 2.58 | 447 |