#IFECompound(s)RNA source organismTitleMethodResolutionDate
14IOA|1|X (rep)23S ribosomal RNADeinococcus radioduransCrystal structure of compound 4e bound to large ribosomal subunit (50S) from Deinococcus radioduransX-RAY DIFFRACTION3.22013-03-06
24IO9|1|X23S ribosomal RNADeinococcus radioduransCrystal structure of compound 4d bound to large ribosomal subunit (50S) from Deinococcus radioduransX-RAY DIFFRACTION3.22013-03-06
34IOC|1|X23S ribosomal RNADeinococcus radioduransCrystal structure of compound 4f bound to large ribosomal subunit (50S) from Deinococcus radioduransX-RAY DIFFRACTION3.62013-03-06
42ZJR|1|Xribosomal 23S RNADeinococcus radioduransRefined native structure of the large ribosomal subunit (50S) from Deinococcus radioduransX-RAY DIFFRACTION2.912008-06-17
53CF5|1|XRRNA-23S RIBOSOMAL RNADeinococcus radioduransThiopeptide antibiotic Thiostrepton bound to the large ribosomal subunit of Deinococcus radioduransX-RAY DIFFRACTION3.32008-06-17
62ZJQ|1|Xribosomal 23S RNADeinococcus radioduransInteraction of L7 with L11 induced by Microccocin binding to the Deinococcus radiodurans 50S subunitX-RAY DIFFRACTION3.32008-06-17
72ZJP|1|XRIBOSOMAL 23S RNADeinococcus radioduransThiopeptide antibiotic Nosiheptide bound to the large ribosomal subunit of Deinococcus radioduransX-RAY DIFFRACTION3.72008-06-17
84U67|1|X23s RNADeinococcus radioduransCrystal structure of the large ribosomal subunit (50S) of Deinococcus radiodurans containing a three residue insertion in L22X-RAY DIFFRACTION3.652015-08-05
93DLL|1|XrRNA-23S ribosomal RNADeinococcus radioduransThe oxazolidinone antibiotics perturb the ribosomal peptidyl-transferase center and effect tRNA positioningX-RAY DIFFRACTION3.52008-09-16
102AAR|1|023S ribosomal RNADeinococcus radioduransStructure of trigger factor binding domain in biologically homologous complex with eubacterial ribosome.X-RAY DIFFRACTION3.52005-08-23
112OGM|1|023S ribosomal RNADeinococcus radioduransThe crystal structure of the large ribosomal subunit from Deinococcus radiodurans complexed with the pleuromutilin derivative SB-571519X-RAY DIFFRACTION3.52007-05-01
123PIO|1|XRIBOSOMAL 23S RNADeinococcus radioduransCrystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the large ribosomal subunitX-RAY DIFFRACTION3.252011-02-23
133JQ4|1|A23S ribosomal RNADeinococcus radioduransThe structure of the complex of the large ribosomal subunit from D. Radiodurans with the antibiotic lankacidinX-RAY DIFFRACTION3.522010-09-08
142D3O|1|023S RIBOSOMAL RNADeinococcus radioduransStructure of Ribosome Binding Domain of the Trigger Factor on the 50S ribosomal subunit from D. radioduransX-RAY DIFFRACTION3.352005-12-06
151Y69|1|023S ribosomal RNADeinococcus radioduransRRF domain I in complex with the 50S ribosomal subunit from Deinococcus radioduransX-RAY DIFFRACTION3.332005-03-01
163PIP|1|XRIBOSOMAL 23S RNADeinococcus radioduransCrystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the large ribosomal subunitX-RAY DIFFRACTION3.452011-02-23
172OGO|1|023S ribosomal RNADeinococcus radioduransThe crystal structure of the large ribosomal subunit from Deinococcus radiodurans complexed with the pleuromutilin derivative retapamulin (SB-275833)X-RAY DIFFRACTION3.662007-05-01
181JZY|1|A23S rRNADeinococcus radioduransStructural Basis for the Interaction of Antibiotics with the Peptidyl Transferase Center in EubacteriaX-RAY DIFFRACTION3.52001-10-26
191K01|1|A23S rRNADeinococcus radioduransStructural Basis for the Interaction of Antibiotics with the Peptidyl Transferase Center in EubacteriaX-RAY DIFFRACTION3.52001-10-26
201JZX|1|A23S rRNADeinococcus radioduransStructural Basis for the Interaction of Antibiotics with the Peptidyl Transferase Center in EubacteriaX-RAY DIFFRACTION3.12001-10-26
211JZZ|1|A23S rRNADeinococcus radioduransStructural Basis for the Interaction of Antibiotics with the Peptidyl Transferase Center in EubacteriaX-RAY DIFFRACTION3.82001-10-26
221J5A|1|A23S RRNADeinococcus radioduransSTRUCTURAL BASIS FOR THE INTERACTION OF ANTIBIOTICS WITH THE PEPTIDYL TRANSFERASE CENTER IN EUBACTERIAX-RAY DIFFRACTION3.52002-03-08
232O44|1|A23S rRNADeinococcus radioduransStructure of 23S rRNA of the large ribosomal subunit from Deinococcus radiodurans in complex with the macrolide josamycinX-RAY DIFFRACTION3.32007-12-04
242OGN|1|023S ribosomal RNADeinococcus radioduransThe crystal structure of the large ribosomal subunit from Deinococcus radiodurans complexed with the pleuromutilin derivative SB-280080X-RAY DIFFRACTION3.562007-05-01
251NWX|1|023S RIBOSOMAL RNADeinococcus radioduransCOMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH ABT-773X-RAY DIFFRACTION3.52003-03-18
261OND|1|023S RIBOSOMAL RNADeinococcus radioduransTHE CRYSTAL STRUCTURE OF THE 50S LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS COMPLEXED WITH TROLEANDOMYCIN MACROLIDE ANTIBIOTICX-RAY DIFFRACTION3.42003-04-15
271NWY|1|023S RIBOSOMAL RRNADeinococcus radioduransCOMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCINX-RAY DIFFRACTION3.32003-03-18
281NKW|1|023S ribosomal RNADeinococcus radioduransCrystal Structure Of The Large Ribosomal Subunit From Deinococcus RadioduransX-RAY DIFFRACTION3.12003-02-11
293FWO|1|A23S RIBOSOMAL RNADeinococcus radioduransThe large ribosomal subunit from Deinococcus radiodurans complexed with MethymycinX-RAY DIFFRACTION3.712010-01-19
301NJO|1|023S ribosomal RNA, RNA ACC(Puromycin)Deinococcus radioduransThe crystal structure of the 50S Large ribosomal subunit from Deinococcus radiodurans complexed with a short substrate analog ACCPuromycin (ACCP)X-RAY DIFFRACTION3.72003-02-11
311P9X|1|023S RIBOSOMAL RNADeinococcus radioduransTHE CRYSTAL STRUCTURE OF THE 50S LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS COMPLEXED WITH TELITHROMYCIN KETOLIDE ANTIBIOTICX-RAY DIFFRACTION3.42003-08-05
321NJP|1|023S ribosomal RNADeinococcus radioduransThe crystal structure of the 50S Large ribosomal subunit from Deinococcus radiodurans complexed with a tRNA acceptor stem mimic (ASM)X-RAY DIFFRACTION3.52003-02-11
331NJM|1|023S ribosomal RNADeinococcus radioduransThe crystal structure of the 50S Large ribosomal subunit from Deinococcus radiodurans complexed with a tRNA acceptor stem mimic (ASM) and the antibiotic sparsomycinX-RAY DIFFRACTION3.62003-02-11
341NJN|1|023S ribosomal RNADeinococcus radioduransThe crystal structure of the 50S Large ribosomal subunit from Deinococcus radiodurans complexed with the antibiotic sparsomycinX-RAY DIFFRACTION3.72003-02-11
352O43|1|A23S rRNADeinococcus radioduransStructure of 23S rRNA of the large ribosomal subunit from Deinococcus radiodurans in complex with the macrolide erythromycylamineX-RAY DIFFRACTION3.62007-12-04
361SM1|1|023S RIBOSOMAL RNADeinococcus radioduransCOMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH QUINUPRISTIN AND DALFOPRISTINX-RAY DIFFRACTION3.422004-08-03
371XBP|1|023S RIBOSOMAL RNADeinococcus radioduransInhibition of peptide bond formation by pleuromutilins: The structure of the 50S ribosomal subunit from Deinococcus radiodurans in complex with TiamulinX-RAY DIFFRACTION3.52005-03-01
381Z58|1|223S RIBOSOMAL RNADeinococcus radioduransCrystal structure of a complex of the ribosome large subunit with rapamycinX-RAY DIFFRACTION3.82005-06-28
392O45|1|A23S rRNADeinococcus radioduransStructure of the 23S rRNA of the large ribosomal subunit from Deinococcus Radiodurans in complex with the macrolide RU-69874X-RAY DIFFRACTION3.62007-12-04

Release history

Release2.352.362.372.382.392.402.412.422.432.442.452.462.472.48
Date2015-08-072015-08-142015-08-212015-08-282015-09-042015-09-112015-09-182015-09-252015-10-022015-10-092015-10-162015-10-232015-10-302015-11-06

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_88987.2NR_20.0_88987.32.49(39) 1SM1|1|0, 1Y69|1|0, 2AAR|1|0, 2O43|1|A, 2O45|1|A, 2OGN|1|0, 2ZJP|1|X, 2ZJR|1|X, 3DLL|1|X, 3JQ4|1|A, 3PIP|1|X, 1J5A|1|A, 4IOA|1|X, 1JZY|1|A, 4U67|1|X, 1K01|1|A, 1NJN|1|0, 1NJP|1|0, 1NWX|1|0, 1OND|1|0, 1XBP|1|0, 1Z58|1|2, 2D3O|1|0, 2O44|1|A, 2OGM|1|0, 2OGO|1|0, 2ZJQ|1|X, 3CF5|1|X, 3FWO|1|A, 3PIO|1|X, 4IO9|1|X, 1JZX|1|A, 4IOC|1|X, 1JZZ|1|A, 1NJM|1|0, 1NJO|1|0, 1NKW|1|0, 1NWY|1|0, 1P9X|1|0(0) (2) 5DM7|1|X, 5DM6|1|X
NR_all_88987.2NR_3.0_88987.32.49(1) 2ZJR|1|X(38) 2D3O|1|0, 2OGM|1|0, 2ZJQ|1|X, 3JQ4|1|A, 4IOA|1|X, 1JZX|1|A, 1NJM|1|0, 1NKW|1|0, 1P9X|1|0, 1JZZ|1|A, 1NJO|1|0, 1NWY|1|0, 1XBP|1|0, 2O45|1|A, 2ZJP|1|X, 3FWO|1|A, 4IO9|1|X, 1J5A|1|A, 1K01|1|A, 1NJP|1|0, 1OND|1|0, 1Y69|1|0, 1JZY|1|A, 1NJN|1|0, 1NWX|1|0, 1SM1|1|0, 2AAR|1|0, 2O44|1|A, 2OGO|1|0, 3DLL|1|X, 3PIP|1|X, 4U67|1|X, 1Z58|1|2, 2O43|1|A, 2OGN|1|0, 3CF5|1|X, 3PIO|1|X, 4IOC|1|X(2) 5DM6|1|X, 5DM7|1|X
NR_all_88987.2NR_3.5_88987.32.49(25) 2OGM|1|0, 1NWY|1|0, 2AAR|1|0, 1NJP|1|0, 3PIP|1|X, 3DLL|1|X, 2D3O|1|0, 2ZJR|1|X, 1NKW|1|0, 3PIO|1|X, 2ZJQ|1|X, 1OND|1|0, 3CF5|1|X, 2O44|1|A, 1NWX|1|0, 4IOA|1|X, 4IO9|1|X, 1XBP|1|0, 1P9X|1|0, 1JZY|1|A, 1Y69|1|0, 1J5A|1|A, 1SM1|1|0, 1K01|1|A, 1JZX|1|A(14) 3FWO|1|A, 1JZZ|1|A, 4IOC|1|X, 1NJN|1|0, 1Z58|1|2, 2O45|1|A, 2OGO|1|0, 4U67|1|X, 1NJM|1|0, 1NJO|1|0, 2O43|1|A, 2OGN|1|0, 2ZJP|1|X, 3JQ4|1|A(2) 5DM6|1|X, 5DM7|1|X
NR_all_88987.2NR_4.0_88987.32.49(39) 2ZJR|1|X, 3DLL|1|X, 3JQ4|1|A, 3PIP|1|X, 1J5A|1|A, 4IOA|1|X, 1JZY|1|A, 4U67|1|X, 1K01|1|A, 1NJN|1|0, 1NJP|1|0, 1NWX|1|0, 1OND|1|0, 1SM1|1|0, 1Y69|1|0, 2AAR|1|0, 2O43|1|A, 2O45|1|A, 2OGN|1|0, 2ZJP|1|X, 2ZJQ|1|X, 3CF5|1|X, 3FWO|1|A, 3PIO|1|X, 4IO9|1|X, 1JZX|1|A, 4IOC|1|X, 1JZZ|1|A, 1NJM|1|0, 1NJO|1|0, 1NKW|1|0, 1NWY|1|0, 1P9X|1|0, 1XBP|1|0, 1Z58|1|2, 2D3O|1|0, 2O44|1|A, 2OGM|1|0, 2OGO|1|0(0) (2) 5DM6|1|X, 5DM7|1|X
NR_all_88987.2NR_all_88987.32.49(39) 2AAR|1|0, 2O43|1|A, 2O45|1|A, 2OGN|1|0, 2ZJP|1|X, 2ZJR|1|X, 3DLL|1|X, 3JQ4|1|A, 3PIP|1|X, 1J5A|1|A, 4IOA|1|X, 1JZY|1|A, 4U67|1|X, 1K01|1|A, 1NJN|1|0, 1NJP|1|0, 1NWX|1|0, 1OND|1|0, 1SM1|1|0, 1Y69|1|0, 1Z58|1|2, 2D3O|1|0, 2O44|1|A, 2OGM|1|0, 2OGO|1|0, 2ZJQ|1|X, 3CF5|1|X, 3FWO|1|A, 3PIO|1|X, 4IO9|1|X, 1JZX|1|A, 4IOC|1|X, 1JZZ|1|A, 1NJM|1|0, 1NJO|1|0, 1NKW|1|0, 1NWY|1|0, 1P9X|1|0, 1XBP|1|0(0) (2) 5DM7|1|X, 5DM6|1|X

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength