#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
15L00|1|A+ 5L00|1|B (rep)RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*GP*G)-3')synthetic constructSelf-complimentary RNA 15mer binding with GMP monomersX-ray diffraction1.252016-12-07
25L00|1|C+ 5L00|1|DRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*GP*G)-3')synthetic constructSelf-complimentary RNA 15mer binding with GMP monomersX-ray diffraction1.252016-12-07
35KRG|1|C+ 5KRG|1|DRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*GP*G)-3')synthetic constructRNA 15mer duplex binding with PZG monomerX-ray diffraction1.62016-12-07
45KRG|1|A+ 5KRG|1|BRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*GP*G)-3')synthetic constructRNA 15mer duplex binding with PZG monomerX-ray diffraction1.62016-12-07
55V0H|1|A+ 5V0H|1|BRNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*GP*G)-3')synthetic constructRNA duplex with 2-MeImpG analogue bound-one binding siteX-ray diffraction1.92017-03-08

Release history

Release2.1182.1192.1202.1212.1222.1232.1242.1252.1262.1272.1282.1292.1302.1312.1322.1332.1342.1352.1362.1372.1382.1392.1402.1412.1422.1432.1442.1452.1462.1472.1482.1492.1502.1512.1522.1532.1542.1552.1562.1572.1583.03.13.23.33.43.53.63.73.83.93.103.113.123.133.143.153.163.173.183.193.203.213.223.23
Date2017-03-102017-03-172017-03-242017-03-312017-04-112017-04-152017-04-262017-04-292017-05-092017-05-152017-05-202017-05-272017-06-072017-06-112017-06-212017-06-242017-06-282017-07-042017-07-102017-07-152017-07-262017-07-312017-08-052017-08-122017-08-192017-08-262017-09-032017-09-092017-09-162017-09-232017-09-302017-10-072017-10-142017-10-212017-10-282017-11-032017-11-102017-11-172017-11-242017-12-012017-12-082017-12-152017-12-222017-12-292018-01-052018-01-122018-01-192018-01-262018-02-022018-02-092018-02-162018-02-232018-03-012018-03-082018-03-152018-03-222018-03-292018-04-062018-04-132018-04-202018-04-272018-05-042018-05-112018-05-182018-05-25

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_89026.2NR_all_89026.12.118(4) 5L00|1|C+5L00|1|D, 5L00|1|A+5L00|1|B, 5KRG|1|C+5KRG|1|D, 5KRG|1|A+5KRG|1|B(1) 5V0H|1|A+5V0H|1|B(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_89026.2NR_all_16232.13.24(5) 5L00|1|C+5L00|1|D, 5L00|1|A+5L00|1|B, 5KRG|1|C+5KRG|1|D, 5KRG|1|A+5KRG|1|B, 5V0H|1|A+5V0H|1|B(0) (3) 6C8N|1|A+6C8N|1|B, 6C8M|1|A+6C8M|1|B, 6C8O|1|A+6C8O|1|B

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
15L00|1|A+5L00|1|BSelf-complimentary RNA 15mer binding with GMP monomersX-RAY DIFFRACTION1.2513
25L00|1|C+5L00|1|DSelf-complimentary RNA 15mer binding with GMP monomersX-RAY DIFFRACTION1.2513
35KRG|1|A+5KRG|1|BRNA 15mer duplex binding with PZG monomerX-RAY DIFFRACTION1.611
45KRG|1|C+5KRG|1|DRNA 15mer duplex binding with PZG monomerX-RAY DIFFRACTION1.611
55V0H|1|A+5V0H|1|BRNA duplex with 2-MeImpG analogue bound-one binding siteX-RAY DIFFRACTION1.911
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