#IFECompound(s)RNA source organismTitleMethodResolutionDate
16N6I|1|C (rep)RNA (5'-R(P*GP*G)-3')synthetic constructHuman REXO2 bound to pGGX-RAY DIFFRACTION1.432019-06-12
26N6I|1|DRNA (5'-R(P*GP*G)-3')synthetic constructHuman REXO2 bound to pGGX-RAY DIFFRACTION1.432019-06-12
36N6A|1|DRNA (5'-R(P*GP*G)-3')Pseudomonas aeruginosaVibrio cholerae Oligoribonuclease bound to pGGX-RAY DIFFRACTION1.52019-06-12
43U2E|1|DRNA (5'-R(P*GP*G)-3')EAL domain of phosphodiesterase PdeA in complex with 5'-pGpG and Mg++X-RAY DIFFRACTION2.322011-10-12
53U2E|1|CRNA (5'-R(P*GP*G)-3')EAL domain of phosphodiesterase PdeA in complex with 5'-pGpG and Mg++X-RAY DIFFRACTION2.322011-10-12
65UEF|1|CRNA (5'-R(P*GP*G)-3')synthetic constructRNA primer-template complex with guanosine dinucleotide p(5')G(3')p(5')G ligandX-RAY DIFFRACTION2.12017-07-05
75UEF|1|DRNA (5'-R(P*GP*G)-3')synthetic constructRNA primer-template complex with guanosine dinucleotide p(5')G(3')p(5')G ligandX-RAY DIFFRACTION2.12017-07-05
84X4U|1|HRNA (5'-D(*GP*G)-3')Homo sapiensCrystal structure of the A.fulgidus CCA-adding enzyme in complex with a human MenBeta minihelix ending in CCACCX-RAY DIFFRACTION2.72015-02-11
94AFY|1|D5'-R(*GP*GP)-3'synthetic constructCrystal structure of the FimX EAL domain in complex with reaction product pGpGX-RAY DIFFRACTION2.012013-01-09
106OY5|1|IRNA (5'-D(*(GTP))-R(P*G)-3')Thermus thermophilusX-ray crystal structure of a bacterial reiterative transcription complex of pyrG promoter at 3 minX-RAY DIFFRACTION3.12019-06-05
114AFY|1|C5'-R(*GP*GP)-3'synthetic constructCrystal structure of the FimX EAL domain in complex with reaction product pGpGX-RAY DIFFRACTION2.012013-01-09
124LQ3|1|R5'-R(P*GP*G)-3'Crystal structure of human norovirus RNA-dependent RNA-polymerase bound to the inhibitor PPNDSX-RAY DIFFRACTION2.62014-02-12
136S0M|1|CRNA (5'-R(P*G)-3')Escherichia coliStructural and dynamic studies provide insights into specificity and allosteric regulation of Ribonuclease AS, a key enzyme in mycobacterial virulenceX-RAY DIFFRACTION22019-08-28

Release history

Release3.893.903.913.923.933.94
Date2019-08-282019-09-042019-09-112019-09-192019-09-252019-10-03

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_89612.6NR_all_89612.53.89(12) 3U2E|1|C, 6OY5|1|I, 6N6I|1|D, 6N6I|1|C, 6N6A|1|D, 5UEF|1|D, 5UEF|1|C, 4X4U|1|H, 4LQ3|1|R, 4AFY|1|D, 4AFY|1|C, 3U2E|1|D(1) 6S0M|1|C(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_89612.6NR_all_89612.73.95(13) 6N6A|1|D, 6S0M|1|C, 3U2E|1|C, 4LQ3|1|R, 5UEF|1|D, 6OY5|1|I, 4AFY|1|D, 5UEF|1|C, 6N6I|1|D, 4AFY|1|C, 4X4U|1|H, 6N6I|1|C, 3U2E|1|D(0) (4) 6IJ2|1|E, 6IJ2|1|H, 6IJ2|1|G, 6IJ2|1|F

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16OY5|1|IX-ray crystal structure of a bacterial reiterative transcription complex of pyrG promoter at 3 minX-RAY DIFFRACTION3.11
26S0M|1|CStructural and dynamic studies provide insights into specificity and allosteric regulation of Ribonuclease AS, a key enzyme in mycobacterial virulenceX-RAY DIFFRACTION21
36N6I|1|CHuman REXO2 bound to pGGX-RAY DIFFRACTION1.432
46N6A|1|DVibrio cholerae Oligoribonuclease bound to pGGX-RAY DIFFRACTION1.52
54LQ3|1|RCrystal structure of human norovirus RNA-dependent RNA-polymerase bound to the inhibitor PPNDSX-RAY DIFFRACTION2.62
64X4U|1|HCrystal structure of the A.fulgidus CCA-adding enzyme in complex with a human MenBeta minihelix ending in CCACCX-RAY DIFFRACTION2.72
73U2E|1|DEAL domain of phosphodiesterase PdeA in complex with 5'-pGpG and Mg++X-RAY DIFFRACTION2.322
84AFY|1|DCrystal structure of the FimX EAL domain in complex with reaction product pGpGX-RAY DIFFRACTION2.012
94AFY|1|CCrystal structure of the FimX EAL domain in complex with reaction product pGpGX-RAY DIFFRACTION2.012
103U2E|1|CEAL domain of phosphodiesterase PdeA in complex with 5'-pGpG and Mg++X-RAY DIFFRACTION2.322
116N6I|1|DHuman REXO2 bound to pGGX-RAY DIFFRACTION1.432
125UEF|1|CRNA primer-template complex with guanosine dinucleotide p(5')G(3')p(5')G ligandX-RAY DIFFRACTION2.12
135UEF|1|DRNA primer-template complex with guanosine dinucleotide p(5')G(3')p(5')G ligandX-RAY DIFFRACTION2.12