Equivalence class NR_all_91467.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4V6X|1|A5+ 4V6X|1|A8 (rep) | Large subunit ribosomal RNA + 5.8S ribosomal RNA | 28S ribosomal RNA, 5.8S ribosomal RNA | Homo sapiens | Eukarya | RF02543 + RF00002 | Structure of the human 80S ribosome | Electron microscopy | 5 | 2014-07-09 |
| 2 | 5AJ0|1|A2+ 5AJ0|1|A3 | Large subunit ribosomal RNA + 5.8S ribosomal RNA | 28S ribosomal RNA, 5.8S ribosomal RNA | Homo sapiens | Eukarya | RF02543 + RF00002 | Cryo electron microscopy of actively translating human polysomes (POST state). | Electron microscopy | 3.5 | 2015-05-20 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_all_91467.1 | NR_all_27761.1 | 2.24 | (1) 4V6X|1|A5+4V6X|1|A8 | (1) 5AJ0|1|A2+5AJ0|1|A3 | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_91467.1 | NR_20.0_91467.2 | 2.27 | (2) 4V6X|1|A5+4V6X|1|A8, 5AJ0|1|A2+5AJ0|1|A3 | (0) | (0) |
| NR_all_91467.1 | NR_3.5_91467.2 | 2.27 | (1) 5AJ0|1|A2+5AJ0|1|A3 | (1) 4V6X|1|A5+4V6X|1|A8 | (0) |
| NR_all_91467.1 | NR_4.0_91467.2 | 2.27 | (1) 5AJ0|1|A2+5AJ0|1|A3 | (1) 4V6X|1|A5+4V6X|1|A8 | (0) |
| NR_all_91467.1 | NR_all_91467.2 | 2.27 | (2) 4V6X|1|A5+4V6X|1|A8, 5AJ0|1|A2+5AJ0|1|A3 | (0) | (1) 4UG0|1|L5+4UG0|1|L8 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 4V6X|1|A5+4V6X|1|A8 | Structure of the human 80S ribosome | ELECTRON MICROSCOPY | 5 | 4298 |
| 2 | 5AJ0|1|A2+5AJ0|1|A3 | Cryo electron microscopy of actively translating human polysomes (POST state). | ELECTRON MICROSCOPY | 3.5 | 3612 |