Equivalence class NR_all_91467.2 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Domain | Rfam | Title | Method | Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4V6X|1|A5+ 4V6X|1|A8 (rep) | Large subunit ribosomal RNA + 5.8S ribosomal RNA | 28S ribosomal RNA, 5.8S ribosomal RNA | Homo sapiens | Eukarya | RF02543 + RF00002 | Structure of the human 80S ribosome | Electron microscopy | 5 | 2014-07-09 |
| 2 | 5AJ0|1|A2+ 5AJ0|1|A3 | Large subunit ribosomal RNA + 5.8S ribosomal RNA | 28S ribosomal RNA, 5.8S ribosomal RNA | Homo sapiens | Eukarya | RF02543 + RF00002 | Cryo electron microscopy of actively translating human polysomes (POST state). | Electron microscopy | 3.5 | 2015-05-20 |
| 3 | 4UG0|1|L5+ 4UG0|1|L8 | Large subunit ribosomal RNA + 5.8S ribosomal RNA | 28S ribosomal RNA, 5.8S ribosomal RNA | Homo sapiens | Eukarya | RF02543 + RF00002 | STRUCTURE OF THE HUMAN 80S RIBOSOME | Electron microscopy | 3.6 | 2015-06-10 |
Release history
| Release | 2.27 | 2.28 | 2.29 | 2.30 | 2.31 | 2.32 | 2.33 | 2.34 | 2.35 | 2.36 | 2.37 | 2.38 | 2.39 | 2.40 | 2.41 | 2.42 | 2.43 | 2.44 | 2.45 | 2.46 | 2.47 | 2.48 | 2.49 | 2.50 | 2.51 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2015-06-12 | 2015-06-19 | 2015-06-26 | 2015-07-03 | 2015-07-10 | 2015-07-17 | 2015-07-24 | 2015-07-31 | 2015-08-07 | 2015-08-14 | 2015-08-21 | 2015-08-28 | 2015-09-04 | 2015-09-11 | 2015-09-18 | 2015-09-25 | 2015-10-02 | 2015-10-09 | 2015-10-16 | 2015-10-23 | 2015-10-30 | 2015-11-06 | 2015-11-13 | 2015-11-20 | 2015-11-27 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_all_91467.2 | NR_all_91467.1 | 2.27 | (2) 4V6X|1|A5+4V6X|1|A8, 5AJ0|1|A2+5AJ0|1|A3 | (1) 4UG0|1|L5+4UG0|1|L8 | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_91467.2 | NR_20.0_91467.3 | 2.52 | (2) 5AJ0|1|A2+5AJ0|1|A3, 4V6X|1|A5+4V6X|1|A8 | (1) 4UG0|1|L5+4UG0|1|L8 | (1) 5A8L|1|A |
| NR_all_91467.2 | NR_3.5_91467.3 | 2.52 | (1) 5AJ0|1|A2+5AJ0|1|A3 | (2) 4V6X|1|A5+4V6X|1|A8, 4UG0|1|L5+4UG0|1|L8 | (0) |
| NR_all_91467.2 | NR_4.0_91467.3 | 2.52 | (1) 5AJ0|1|A2+5AJ0|1|A3 | (2) 4V6X|1|A5+4V6X|1|A8, 4UG0|1|L5+4UG0|1|L8 | (1) 5A8L|1|A |
| NR_all_91467.2 | NR_all_91467.3 | 2.52 | (3) 5AJ0|1|A2+5AJ0|1|A3, 4V6X|1|A5+4V6X|1|A8, 4UG0|1|L5+4UG0|1|L8 | (0) | (1) 5A8L|1|A |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 4UG0|1|L5+4UG0|1|L8 | STRUCTURE OF THE HUMAN 80S RIBOSOME | ELECTRON MICROSCOPY | 3.6 | 3776 |
| 2 | 4V6X|1|A5+4V6X|1|A8 | Structure of the human 80S ribosome | ELECTRON MICROSCOPY | 5 | 4298 |
| 3 | 5AJ0|1|A2+5AJ0|1|A3 | Cryo electron microscopy of actively translating human polysomes (POST state). | ELECTRON MICROSCOPY | 3.5 | 3612 |