#IFECompound(s)RNA source organismTitleMethodResolutionDate
16UU4|1|333 (rep)RNA 3-mer (dinucleotide GpA-primed synthesis)synthetic constructE. coli sigma-S transcription initiation complex with a 3-nt RNA ('old' crystal soaked with GTP and dinucleotide GpA for 30 minutes)X-RAY DIFFRACTION4.32020-08-26
26UU0|1|333RNA 3-mer (de novo synthesized)synthetic constructE. coli sigma-S transcription initiation complex with a 3-nt RNA and a mismatching GTP ('Fresh' crystal soaked with GTP for 1 hour)X-RAY DIFFRACTION3.92020-08-26
36UUC|1|333RNA 3-mersynthetic constructE. coli sigma-S transcription initiation complex with a 3-nt RNA and a mismatching ATP ('Fresh' crystal soaked with ATP for 2 hours)X-RAY DIFFRACTION4.12020-08-26
46UU2|1|333RNA 3-mersynthetic constructE. coli sigma-S transcription initiation complex with 3-nt RNA ('Old' crystal soaked with GTP and ATP for 30 minutes)X-RAY DIFFRACTION4.42020-08-26
56B6H|1|3NASCENT RNA 3-MEREscherichia coliThe cryo-EM structure of a bacterial class I transcription activation complexELECTRON MICROSCOPY3.92017-11-15
66PB4|1|3Nascent RNAEscherichia coliThe E. coli class-II CAP-dependent transcription activation complex with de novo RNA transcript at the state 2ELECTRON MICROSCOPY4.352020-03-18

Release history

Release3.141
Date2020-08-26

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_93339.1NR_all_61908.13.141(2) 6PB4|1|3, 6B6H|1|3(4) 6UU4|1|333, 6UU2|1|333, 6UU0|1|333, 6UUC|1|333(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength