BGSU RNA Site //

Equivalence class NR_all_93855.3 Obsolete

#IFEStandardized nameMoleculeOrganismDomainRfamTitleMethodÅDate
16VMI|1|AA (rep)Small subunit ribosomal RNA12s rRNAHomo sapiensMitochondriaRF00177Structure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)ELECTRON MICROSCOPY2.962020-08-05
26VLZ|1|AASmall subunit ribosomal RNA12s rRNAHomo sapiensMitochondriaRF00177Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)ELECTRON MICROSCOPY2.972020-08-05
36RW4|1|ASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Structure of human mitochondrial 28S ribosome in complex with mitochondrial IF3ELECTRON MICROSCOPY2.972020-06-03
46RW5|1|ASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Structure of human mitochondrial 28S ribosome in complex with mitochondrial IF2 and IF3ELECTRON MICROSCOPY3.142020-06-03
56ZSC|1|AASmall subunit ribosomal RNA12S rRNAHomo sapiensMitochondriaRF00177Human mitochondrial ribosome in complex with E-site tRNAELECTRON MICROSCOPY3.52020-09-16
66ZSD|1|AASmall subunit ribosomal RNA12SrRNAHomo sapiensMitochondriaRF00177Human mitochondrial ribosome in complex with mRNA, P-site tRNA and E-site tRNAELECTRON MICROSCOPY3.72020-09-16
73J9M|1|AASmall subunit ribosomal RNA12S rRNAHomo sapiensMitochondriaRF00177Structure of the human mitochondrial ribosome (class 1)ELECTRON MICROSCOPY3.52015-04-15
86ZSA|1|AASmall subunit ribosomal RNA12S rRNAHomo sapiensMitochondriaRF00177Human mitochondrial ribosome bound to mRNA, A-site tRNA and P-site tRNAELECTRON MICROSCOPY42020-10-21
96ZSG|1|AASmall subunit ribosomal RNA12S rRNAHomo sapiensMitochondriaRF00177Human mitochondrial ribosome in complex with mRNA, A-site tRNA, P-site tRNA and E-site tRNAELECTRON MICROSCOPY42020-10-14
106ZS9|1|AASmall subunit ribosomal RNA12S rRNAHomo sapiensMitochondriaRF00177Human mitochondrial ribosome in complex with ribosome recycling factorELECTRON MICROSCOPY42020-10-14
116NU2|1|AASmall subunit ribosomal RNA12S rRNAHomo sapiensMitochondriaRF00177Structural insights into unique features of the human mitochondrial ribosome recyclingELECTRON MICROSCOPY3.92019-04-17
126ZSB|1|AASmall subunit ribosomal RNA12S rRNAHomo sapiensMitochondriaRF00177Human mitochondrial ribosome in complex with mRNA and P-site tRNAELECTRON MICROSCOPY4.52020-09-16
136NU3|1|AASmall subunit ribosomal RNA12S rRNAHomo sapiensMitochondriaRF00177Structural insights into unique features of the human mitochondrial ribosome recyclingELECTRON MICROSCOPY4.42019-04-17
146ZSE|1|AASmall subunit ribosomal RNA12S rRNAHomo sapiensMitochondriaRF00177Human mitochondrial ribosome in complex with mRNA, A/P-tRNA and P/E-tRNAELECTRON MICROSCOPY52020-09-16

Release history

Release3.1493.1503.1513.1523.1533.1543.1553.1563.157
Date2020-10-212020-10-282020-11-042020-11-112020-11-182020-11-252020-12-022020-12-092020-12-16

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_93855.3NR_all_93855.23.149(13) 6ZSD|1|AA, 6ZSC|1|AA, 6ZSB|1|AA, 6ZS9|1|AA, 6VMI|1|AA, 6VLZ|1|AA, 6RW5|1|A, 6RW4|1|A, 6NU3|1|AA, 6NU2|1|AA, 3J9M|1|AA, 6ZSG|1|AA, 6ZSE|1|AA(1) 6ZSA|1|AA(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_93855.3NR_all_93855.43.158(14) 6ZSA|1|AA, 6ZSE|1|AA, 3J9M|1|AA, 6RW5|1|A, 6ZS9|1|AA, 6ZSD|1|AA, 6RW4|1|A, 6VMI|1|AA, 6ZSC|1|AA, 6NU3|1|AA, 6ZSB|1|AA, 6ZSG|1|AA, 6NU2|1|AA, 6VLZ|1|AA(0) (4) 7A5G|1|A6, 7A5F|1|A6, 7A5K|1|A6, 7A5I|1|A6

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16VLZ|1|AAStructure of the human mitochondrial ribosome-EF-G1 complex (ClassI)ELECTRON MICROSCOPY2.97944
26VMI|1|AAStructure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)ELECTRON MICROSCOPY2.96944
36RW4|1|AStructure of human mitochondrial 28S ribosome in complex with mitochondrial IF3ELECTRON MICROSCOPY2.97950
46RW5|1|AStructure of human mitochondrial 28S ribosome in complex with mitochondrial IF2 and IF3ELECTRON MICROSCOPY3.14950
53J9M|1|AAStructure of the human mitochondrial ribosome (class 1)ELECTRON MICROSCOPY3.5923
66ZSA|1|AAHuman mitochondrial ribosome bound to mRNA, A-site tRNA and P-site tRNAELECTRON MICROSCOPY4927
76ZSG|1|AAHuman mitochondrial ribosome in complex with mRNA, A-site tRNA, P-site tRNA and E-site tRNAELECTRON MICROSCOPY4927
86ZSD|1|AAHuman mitochondrial ribosome in complex with mRNA, P-site tRNA and E-site tRNAELECTRON MICROSCOPY3.7927
96ZSB|1|AAHuman mitochondrial ribosome in complex with mRNA and P-site tRNAELECTRON MICROSCOPY4.5927
106ZSC|1|AAHuman mitochondrial ribosome in complex with E-site tRNAELECTRON MICROSCOPY3.5927
116ZS9|1|AAHuman mitochondrial ribosome in complex with ribosome recycling factorELECTRON MICROSCOPY4927
126ZSE|1|AAHuman mitochondrial ribosome in complex with mRNA, A/P-tRNA and P/E-tRNAELECTRON MICROSCOPY5927
136NU2|1|AAStructural insights into unique features of the human mitochondrial ribosome recyclingELECTRON MICROSCOPY3.9923
146NU3|1|AAStructural insights into unique features of the human mitochondrial ribosome recyclingELECTRON MICROSCOPY4.4923