BGSU RNA Site //

Equivalence class NR_all_94066.3 Obsolete

#IFEStandardized nameMoleculeOrganismDomainRfamTitleMethodÅDate
16HA1|1|a (rep)Small subunit ribosomal RNA16S ribosomal RNABacillus subtilisBacteriaRF00177Cryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycinELECTRON MICROSCOPY3.12018-08-29
27O5B|1|ASmall subunit ribosomal RNA16S rRNA (1533-MER)Bacillus subtilis subsp. subtilis str. 168BacteriaRF00177Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP boundELECTRON MICROSCOPY3.332022-02-02
36HA8|1|aSmall subunit ribosomal RNA16S rRNABacillus subtilisBacteriaRF00177Cryo-EM structure of the ABCF protein VmlR bound to the Bacillus subtilis ribosomeELECTRON MICROSCOPY3.52018-08-29
45NJT|1|ASmall subunit ribosomal RNA16S ribosomal RNABacillus subtilisBacteriaRF00177Structure of the Bacillus subtilis hibernating 100S ribosome reveals the basis for 70S dimerization.ELECTRON MICROSCOPY3.82017-06-14
53J9W|1|AASmall subunit ribosomal RNA16S ribosomal RNA, mRNABacillus subtilisBacteriaRF00177Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complexELECTRON MICROSCOPY3.92015-04-29
66HTQ|1|aSmall subunit ribosomal RNA16S rRNABacillus subtilisBacteriaRF00177Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosomeELECTRON MICROSCOPY4.52019-10-23

Release history

Release3.2163.2173.2183.2193.220
Date2022-02-022022-02-092022-02-162022-02-232022-03-02

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_94066.3NR_all_94066.23.216(5) 6HTQ|1|a, 6HA8|1|a, 6HA1|1|a, 5NJT|1|A, 3J9W|1|AA(1) 7O5B|1|A(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_94066.3NR_all_94066.43.221(6) 7O5B|1|A, 6HTQ|1|a, 6HA8|1|a, 6HA1|1|a, 5NJT|1|A, 3J9W|1|AA(0) (3) 7QV1|1|a, 7QV3|1|a, 7QV2|1|a

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
15NJT|1|AStructure of the Bacillus subtilis hibernating 100S ribosome reveals the basis for 70S dimerization.ELECTRON MICROSCOPY3.81544
23J9W|1|AACryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complexELECTRON MICROSCOPY3.91544
36HTQ|1|aStringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosomeELECTRON MICROSCOPY4.51533
46HA1|1|aCryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycinELECTRON MICROSCOPY3.11533
56HA8|1|aCryo-EM structure of the ABCF protein VmlR bound to the Bacillus subtilis ribosomeELECTRON MICROSCOPY3.51533
67O5B|1|ACryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP boundELECTRON MICROSCOPY3.331533