#IFECompound(s)RNA source organismTitleMethodResolutionDate
16N5P|1|A (rep)RNA (127-MER)Homo sapiensStructure of Human pir-miRNA-340 Apical Loop and One-base-pair Fused to the YdaO Riboswitch ScaffoldX-RAY DIFFRACTION2.992019-11-27
26N5Q|1|ARNA (128-MER)Homo sapiensStructure of Human pir-miRNA-378a Apical Loop and One-base-pair Fused to the YdaO Riboswitch ScaffoldX-RAY DIFFRACTION2.952019-11-27
36N5R|1|ARNA (125-MER)Homo sapiensStructure of Human pir-miRNA-300 Apical Loop Fused to the YdaO Riboswitch ScaffoldX-RAY DIFFRACTION3.082019-11-27
44QK8|1|AC-di-AMP riboswitchThermoanaerobacter pseudethanolicus c-di-AMP riboswitchX-RAY DIFFRACTION3.052014-08-06
56N5T|1|ARNA (126-MER)Homo sapiensStructure of Human pir-miRNA-378a Apical Loop Fused to the YdaO Riboswitch ScaffoldX-RAY DIFFRACTION2.792019-11-27
64QKA|1|AC-di-AMP riboswitchc-di-AMP riboswitch from Thermoanaerobacter pseudethanolicus, iridium hexamine soakX-RAY DIFFRACTION3.22014-08-06
76N5K|1|ARNA (125-MER)Homo sapiensStructure of Human pir-miRNA-449c Apical Loop and One-base-pair Fused to the YdaO Riboswitch ScaffoldX-RAY DIFFRACTION3.12019-11-27
86N5N|1|ARNA (125-MER)Homo sapiensStructure of Human pir-miRNA-208a Apical Loop and One-base-pair Fused to the YdaO Riboswitch ScaffoldX-RAY DIFFRACTION2.952019-11-27
96N5S|1|ARNA (123-MER)Homo sapiensStructure of Human pir-miRNA-320b-2 Apical Loop and One-base-pair Stem Fused to the YdaO Riboswitch ScaffoldX-RAY DIFFRACTION2.82019-11-27
106N5O|1|ARNA (126-MER)Homo sapiensStructure of Human pir-miRNA-202 Apical Loop and One-base-pair Fused to the YdaO Riboswitch ScaffoldX-RAY DIFFRACTION2.712019-11-27
116N5L|1|ARNA (124-MER)Homo sapiensStructure of Human pir-miRNA-19b-2 Apical Loop and One-base-pair Fused to the YdaO Riboswitch ScaffoldX-RAY DIFFRACTION2.852019-11-27

Release history

Release3.1023.1033.1043.1053.1063.1073.1083.1093.1103.1113.1123.1133.1143.1153.1163.1173.1183.1193.1203.1213.1223.1233.1243.1253.1263.1273.1283.129
Date2019-11-272019-12-042019-12-112019-12-182019-12-252020-01-012020-01-082020-01-152020-01-222020-01-292020-02-052020-02-122020-02-192020-02-262020-03-042020-03-112020-03-182020-03-252020-04-012020-04-082020-04-152020-04-222020-04-292020-05-062020-05-132020-05-202020-05-272020-06-03

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_94866.1NR_all_66230.13.102(2) 4QK8|1|A, 4QKA|1|A(9) 6N5K|1|A, 6N5T|1|A, 6N5S|1|A, 6N5R|1|A, 6N5Q|1|A, 6N5P|1|A, 6N5O|1|A, 6N5N|1|A, 6N5L|1|A(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16N5Q|1|AStructure of Human pir-miRNA-378a Apical Loop and One-base-pair Fused to the YdaO Riboswitch ScaffoldX-RAY DIFFRACTION2.95127
26N5T|1|AStructure of Human pir-miRNA-378a Apical Loop Fused to the YdaO Riboswitch ScaffoldX-RAY DIFFRACTION2.79125
36N5N|1|AStructure of Human pir-miRNA-208a Apical Loop and One-base-pair Fused to the YdaO Riboswitch ScaffoldX-RAY DIFFRACTION2.95124
46N5R|1|AStructure of Human pir-miRNA-300 Apical Loop Fused to the YdaO Riboswitch ScaffoldX-RAY DIFFRACTION3.08124
56N5K|1|AStructure of Human pir-miRNA-449c Apical Loop and One-base-pair Fused to the YdaO Riboswitch ScaffoldX-RAY DIFFRACTION3.1124
66N5P|1|AStructure of Human pir-miRNA-340 Apical Loop and One-base-pair Fused to the YdaO Riboswitch ScaffoldX-RAY DIFFRACTION2.99126
76N5S|1|AStructure of Human pir-miRNA-320b-2 Apical Loop and One-base-pair Stem Fused to the YdaO Riboswitch ScaffoldX-RAY DIFFRACTION2.8123
86N5L|1|AStructure of Human pir-miRNA-19b-2 Apical Loop and One-base-pair Fused to the YdaO Riboswitch ScaffoldX-RAY DIFFRACTION2.85123
96N5O|1|AStructure of Human pir-miRNA-202 Apical Loop and One-base-pair Fused to the YdaO Riboswitch ScaffoldX-RAY DIFFRACTION2.71125
104QK8|1|AThermoanaerobacter pseudethanolicus c-di-AMP riboswitchX-RAY DIFFRACTION3.05120
114QKA|1|Ac-di-AMP riboswitch from Thermoanaerobacter pseudethanolicus, iridium hexamine soakX-RAY DIFFRACTION3.2118