Equivalence class NR_all_95478.3 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5A2Q|1|2 (rep) | Small subunit ribosomal RNA | 18S RRNA | Homo sapiens | Eukarya | RF01960 | Structure of the HCV IRES bound to the human ribosome | Electron microscopy | 3.9 | 2015-07-15 |
| 2 | 5AJ0|1|B1 | Small subunit ribosomal RNA | 18S ribosomal RNA | Homo sapiens | Eukarya | RF01960 | Cryo electron microscopy of actively translating human polysomes (POST state). | Electron microscopy | 3.5 | 2015-05-20 |
| 3 | 4V6X|1|B2 | Small subunit ribosomal RNA | 18S ribosomal RNA | Homo sapiens | Eukarya | RF01960 | Structure of the human 80S ribosome | Electron microscopy | 5 | 2014-07-09 |
| 4 | 4UG0|1|S2 | Small subunit ribosomal RNA | 18S ribosomal RNA | Homo sapiens | Eukarya | RF01960 | STRUCTURE OF THE HUMAN 80S RIBOSOME | Electron microscopy | 3.6 | 2015-06-10 |
Release history
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_95478.3 | NR_20.0_95478.4 | 2.52 | (3) 5A2Q|1|2, 4V6X|1|B2, 5AJ0|1|B1 | (1) 4UG0|1|S2 | (1) 5A8L|1|B |
| NR_all_95478.3 | NR_3.5_95478.4 | 2.52 | (1) 5AJ0|1|B1 | (3) 5A2Q|1|2, 4V6X|1|B2, 4UG0|1|S2 | (0) |
| NR_all_95478.3 | NR_4.0_95478.4 | 2.52 | (2) 5AJ0|1|B1, 5A2Q|1|2 | (2) 4V6X|1|B2, 4UG0|1|S2 | (1) 5A8L|1|B |
| NR_all_95478.3 | NR_all_95478.4 | 2.52 | (4) 5AJ0|1|B1, 5A2Q|1|2, 4V6X|1|B2, 4UG0|1|S2 | (0) | (1) 5A8L|1|B |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 4UG0|1|S2 | STRUCTURE OF THE HUMAN 80S RIBOSOME | ELECTRON MICROSCOPY | 3.6 | 1742 |
| 2 | 5AJ0|1|B1 | Cryo electron microscopy of actively translating human polysomes (POST state). | ELECTRON MICROSCOPY | 3.5 | 1708 |
| 3 | 4V6X|1|B2 | Structure of the human 80S ribosome | ELECTRON MICROSCOPY | 5 | 1861 |
| 4 | 5A2Q|1|2 | Structure of the HCV IRES bound to the human ribosome | ELECTRON MICROSCOPY | 3.9 | 1665 |