BGSU RNA Site //

Equivalence class NR_all_95478.3 Obsolete

#IFEStandardized nameMoleculeOrganismDomainRfamTitleMethodÅDate
15A2Q|1|2 (rep)Small subunit ribosomal RNA18S RRNAHomo sapiensEukaryaRF01960Structure of the HCV IRES bound to the human ribosomeELECTRON MICROSCOPY3.92015-07-15
25AJ0|1|B1Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960Cryo electron microscopy of actively translating human polysomes (POST state).ELECTRON MICROSCOPY3.52015-05-20
34V6X|1|B2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960Structure of the human 80S ribosomeELECTRON MICROSCOPY52014-07-09
44UG0|1|S2Small subunit ribosomal RNA18S ribosomal RNAHomo sapiensEukaryaRF01960STRUCTURE OF THE HUMAN 80S RIBOSOMEELECTRON MICROSCOPY3.62015-06-10

Release history

Release2.322.332.342.352.362.372.382.392.402.412.422.432.442.452.462.472.482.492.502.51
Date2015-07-172015-07-242015-07-312015-08-072015-08-142015-08-212015-08-282015-09-042015-09-112015-09-182015-09-252015-10-022015-10-092015-10-162015-10-232015-10-302015-11-062015-11-132015-11-202015-11-27

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_95478.3NR_all_95478.22.32(3) 5AJ0|1|B1, 4V6X|1|B2, 4UG0|1|S2(1) 5A2Q|1|2(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_95478.3NR_20.0_95478.42.52(3) 4V6X|1|B2, 5AJ0|1|B1, 5A2Q|1|2(1) 4UG0|1|S2(1) 5A8L|1|B
NR_all_95478.3NR_3.5_95478.42.52(1) 5AJ0|1|B1(3) 4V6X|1|B2, 4UG0|1|S2, 5A2Q|1|2(0)
NR_all_95478.3NR_4.0_95478.42.52(2) 5AJ0|1|B1, 5A2Q|1|2(2) 4UG0|1|S2, 4V6X|1|B2(1) 5A8L|1|B
NR_all_95478.3NR_all_95478.42.52(4) 5A2Q|1|2, 4V6X|1|B2, 4UG0|1|S2, 5AJ0|1|B1(0) (1) 5A8L|1|B

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
14UG0|1|S2STRUCTURE OF THE HUMAN 80S RIBOSOMEELECTRON MICROSCOPY3.61742
25AJ0|1|B1Cryo electron microscopy of actively translating human polysomes (POST state).ELECTRON MICROSCOPY3.51708
34V6X|1|B2Structure of the human 80S ribosomeELECTRON MICROSCOPY51861
45A2Q|1|2Structure of the HCV IRES bound to the human ribosomeELECTRON MICROSCOPY3.91665