Equivalence class NR_all_96683.1 Obsolete
# | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
---|---|---|---|---|---|---|---|---|---|---|
1 | 5GMF|1|H (rep) | RNA (5'-R(P*UP*UP*UP*U)-3') | Homo sapiens | Eukarya | Crystal structure of monkey TLR7 in complex with guanosine and polyU | X-ray diffraction | 2.5 | 2016-11-02 | ||
2 | 3S4G|1|C+ 3S4G|1|B | RNA (5'-R(P*UP*UP*UP*U)-3'), RNA (5'-R(P*AP*AP*A)-3') | Low Resolution Structure of STNV complexed with RNA | X-ray diffraction | 6 | 2011-08-03 | ||||
3 | 5GMG|1|C | RNA (5'-R(P*UP*UP*UP*U)-3') | Homo sapiens | Eukarya | Crystal structure of monkey TLR7 in complex with loxoribine and polyU | X-ray diffraction | 2.6 | 2016-11-02 | ||
4 | 5GMG|1|D | RNA (5'-R(P*UP*UP*UP*U)-3') | Homo sapiens | Eukarya | Crystal structure of monkey TLR7 in complex with loxoribine and polyU | X-ray diffraction | 2.6 | 2016-11-02 | ||
5 | 3IE1|1|E | RNA (5'-R(P*UP*UP*UP*U)-3') | Crystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNA | X-ray diffraction | 2.85 | 2009-08-04 | ||||
6 | 1NB7|1|E | 5'-R(*UP*UP*UP*U)-3' | HC-J4 RNA polymerase complexed with short RNA template strand | X-ray diffraction | 2.9 | 2003-03-25 | ||||
7 | 5GMF|1|E | RNA (5'-R(P*UP*UP*UP*U)-3') | Homo sapiens | Eukarya | Crystal structure of monkey TLR7 in complex with guanosine and polyU | X-ray diffraction | 2.5 | 2016-11-02 | ||
8 | 3IE1|1|F | RNA (5'-R(P*UP*UP*UP*U)-3') | Crystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNA | X-ray diffraction | 2.85 | 2009-08-04 | ||||
9 | 1NB7|1|F | 5'-R(*UP*UP*UP*U)-3' | HC-J4 RNA polymerase complexed with short RNA template strand | X-ray diffraction | 2.9 | 2003-03-25 | ||||
10 | 5GMF|1|F | RNA (5'-R(P*UP*UP*UP*U)-3') | Homo sapiens | Eukarya | Crystal structure of monkey TLR7 in complex with guanosine and polyU | X-ray diffraction | 2.5 | 2016-11-02 | ||
11 | 5GMF|1|G | RNA (5'-R(P*UP*UP*UP*U)-3') | Homo sapiens | Eukarya | Crystal structure of monkey TLR7 in complex with guanosine and polyU | X-ray diffraction | 2.5 | 2016-11-02 | ||
12 | 3IE1|1|H | RNA (5'-R(P*UP*UP*UP*U)-3') | Crystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNA | X-ray diffraction | 2.85 | 2009-08-04 | ||||
13 | 2QQP|1|R | RNA (5'-R(*UP*UP*UP*U)-3') | Crystal Structure of Authentic Providence Virus | X-ray diffraction | 3.8 | 2009-01-20 | ||||
14 | 4DR7|1|V | 5'-R(*UP*UP*UP*U)-3' | Thermus thermophilus | Bacteria | Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with codon, crystallographically disordered near-cognate transfer RNA anticodon stem-loop mismatched at the second codon position, and streptomycin bound | X-ray diffraction | 3.75 | 2012-11-14 | ||
15 | 3IE1|1|G | RNA (5'-R(P*UP*UP*UP*U)-3') | Crystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNA | X-ray diffraction | 2.85 | 2009-08-04 |
Release history
Release | 2.100 | 2.101 | 2.102 | 2.103 | 2.104 | 2.105 | 2.106 | 2.107 | 2.108 | 2.109 | 2.110 | 2.111 | 2.112 | 2.113 | 2.114 | 2.115 | 2.116 | 2.117 | 2.118 | 2.119 | 2.120 | 2.121 | 2.122 | 2.123 | 2.124 | 2.125 | 2.126 | 2.127 | 2.128 | 2.129 | 2.130 | 2.131 | 2.132 | 2.133 | 2.134 | 2.135 | 2.136 | 2.137 | 2.138 | 2.139 | 2.140 | 2.141 | 2.142 | 2.143 | 2.144 | 2.145 | 2.146 | 2.147 | 2.148 | 2.149 | 2.150 | 2.151 | 2.152 | 2.153 | 2.154 | 2.155 | 2.156 | 2.157 | 2.158 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Date | 2016-11-04 | 2016-11-11 | 2016-11-18 | 2016-11-25 | 2016-12-02 | 2016-12-09 | 2016-12-16 | 2016-12-23 | 2016-12-30 | 2017-01-06 | 2017-01-13 | 2017-01-20 | 2017-01-27 | 2017-02-03 | 2017-02-10 | 2017-02-17 | 2017-02-24 | 2017-03-03 | 2017-03-10 | 2017-03-17 | 2017-03-24 | 2017-03-31 | 2017-04-11 | 2017-04-15 | 2017-04-26 | 2017-04-29 | 2017-05-09 | 2017-05-15 | 2017-05-20 | 2017-05-27 | 2017-06-07 | 2017-06-11 | 2017-06-21 | 2017-06-24 | 2017-06-28 | 2017-07-04 | 2017-07-10 | 2017-07-15 | 2017-07-26 | 2017-07-31 | 2017-08-05 | 2017-08-12 | 2017-08-19 | 2017-08-26 | 2017-09-03 | 2017-09-09 | 2017-09-16 | 2017-09-23 | 2017-09-30 | 2017-10-07 | 2017-10-14 | 2017-10-21 | 2017-10-28 | 2017-11-03 | 2017-11-10 | 2017-11-17 | 2017-11-24 | 2017-12-01 | 2017-12-08 |
Parents
Children
This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
---|---|---|---|---|---|
NR_all_96683.1 | NR_all_96683.2 | 3.0 | (15) 3IE1|1|H, 5GMF|1|F, 5GMG|1|D, 2QQP|1|R, 3IE1|1|G, 5GMF|1|E, 5GMG|1|C, 1NB7|1|F, 3IE1|1|F, 4DR7|1|V, 5GMF|1|H, 1NB7|1|E, 3S4G|1|C+3S4G|1|B, 5GMF|1|G, 3IE1|1|E | (0) | (4) 2ZDE|1|E, 2ZDE|1|H, 2ZDE|1|G, 2ZDE|1|F |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).#S | PDB | Title | Method | Resolution | Length |
---|---|---|---|---|---|
1 | 5GMG|1|D | Crystal structure of monkey TLR7 in complex with loxoribine and polyU | X-RAY DIFFRACTION | 2.6 | 4 |
2 | 5GMF|1|H | Crystal structure of monkey TLR7 in complex with guanosine and polyU | X-RAY DIFFRACTION | 2.5 | 4 |
3 | 5GMF|1|F | Crystal structure of monkey TLR7 in complex with guanosine and polyU | X-RAY DIFFRACTION | 2.5 | 4 |
4 | 5GMF|1|E | Crystal structure of monkey TLR7 in complex with guanosine and polyU | X-RAY DIFFRACTION | 2.5 | 4 |
5 | 5GMF|1|G | Crystal structure of monkey TLR7 in complex with guanosine and polyU | X-RAY DIFFRACTION | 2.5 | 4 |
6 | 5GMG|1|C | Crystal structure of monkey TLR7 in complex with loxoribine and polyU | X-RAY DIFFRACTION | 2.6 | 4 |
7 | 3IE1|1|H | Crystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNA | X-RAY DIFFRACTION | 2.85 | 4 |
8 | 3IE1|1|E | Crystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNA | X-RAY DIFFRACTION | 2.85 | 4 |
9 | 3IE1|1|F | Crystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNA | X-RAY DIFFRACTION | 2.85 | 4 |
10 | 3S4G|1|C+3S4G|1|B | Low Resolution Structure of STNV complexed with RNA | X-RAY DIFFRACTION | 6 | 4 |
11 | 4DR7|1|V | Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with codon, crystallographically disordered near-cognate transfer RNA anticodon stem-loop mismatched at the second codon position, and streptomycin bound | X-RAY DIFFRACTION | 3.75 | 4 |
12 | 2QQP|1|R | Crystal Structure of Authentic Providence Virus | X-RAY DIFFRACTION | 3.8 | 4 |
13 | 3IE1|1|G | Crystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNA | X-RAY DIFFRACTION | 2.85 | 2 |
14 | 1NB7|1|F | HC-J4 RNA polymerase complexed with short RNA template strand | X-RAY DIFFRACTION | 2.9 | 4 |
15 | 1NB7|1|E | HC-J4 RNA polymerase complexed with short RNA template strand | X-RAY DIFFRACTION | 2.9 | 4 |