#IFECompound(s)RNA source organismTitleMethodResolutionDate
15Z4J|1|B (rep)RNA (5'-R(*UP*UP*UP*U)-3')Drosophila melanogasterStructure of Tailor in complex with U4 RNAX-RAY DIFFRACTION1.822018-10-31
25GMF|1|ERNA (5'-R(P*UP*UP*UP*U)-3')Homo sapiensCrystal structure of monkey TLR7 in complex with guanosine and polyUX-RAY DIFFRACTION2.52016-11-02
35GMF|1|HRNA (5'-R(P*UP*UP*UP*U)-3')Homo sapiensCrystal structure of monkey TLR7 in complex with guanosine and polyUX-RAY DIFFRACTION2.52016-11-02
45GMF|1|FRNA (5'-R(P*UP*UP*UP*U)-3')Homo sapiensCrystal structure of monkey TLR7 in complex with guanosine and polyUX-RAY DIFFRACTION2.52016-11-02
55GMF|1|GRNA (5'-R(P*UP*UP*UP*U)-3')Homo sapiensCrystal structure of monkey TLR7 in complex with guanosine and polyUX-RAY DIFFRACTION2.52016-11-02
65GMG|1|DRNA (5'-R(P*UP*UP*UP*U)-3')Homo sapiensCrystal structure of monkey TLR7 in complex with loxoribine and polyUX-RAY DIFFRACTION2.62016-11-02
75GMG|1|CRNA (5'-R(P*UP*UP*UP*U)-3')Homo sapiensCrystal structure of monkey TLR7 in complex with loxoribine and polyUX-RAY DIFFRACTION2.62016-11-02
83IE1|1|ERNA (5'-R(P*UP*UP*UP*U)-3')Crystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-RAY DIFFRACTION2.852009-08-04
93IE1|1|HRNA (5'-R(P*UP*UP*UP*U)-3')Crystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-RAY DIFFRACTION2.852009-08-04
103IE1|1|FRNA (5'-R(P*UP*UP*UP*U)-3')Crystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-RAY DIFFRACTION2.852009-08-04
114DR7|1|V5'-R(*UP*UP*UP*U)-3'Thermus thermophilusCrystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with codon, crystallographically disordered near-cognate transfer RNA anticodon stem-loop mismatched at the second codon position, and streptomycin boundX-RAY DIFFRACTION3.752012-11-14
123IE1|1|GRNA (5'-R(P*UP*UP*UP*U)-3')Crystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-RAY DIFFRACTION2.852009-08-04
133S4G|1|C+ 3S4G|1|BRNA (5'-R(P*UP*UP*UP*U)-3'), RNA (5'-R(P*AP*AP*A)-3')Low Resolution Structure of STNV complexed with RNAX-RAY DIFFRACTION62011-08-03
142QQP|1|RRNA (5'-R(*UP*UP*UP*U)-3')Crystal Structure of Authentic Providence VirusX-RAY DIFFRACTION3.82009-01-20
152ZDE|1|ERNA (5'-D(P*UP*UP*UP*U)-3')Crystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-RAY DIFFRACTION2.852008-11-25
162ZDE|1|FRNA (5'-D(P*UP*UP*UP*U)-3')Crystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-RAY DIFFRACTION2.852008-11-25
172ZDE|1|HRNA (5'-D(P*UP*UP*UP*U)-3')Crystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-RAY DIFFRACTION2.852008-11-25
182ZDE|1|GRNA (5'-D(P*UP*UP*UP*U)-3')Crystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-RAY DIFFRACTION2.852008-11-25
191NB7|1|E5'-R(*UP*UP*UP*U)-3'HC-J4 RNA polymerase complexed with short RNA template strandX-RAY DIFFRACTION2.92003-03-25
201NB7|1|F5'-R(*UP*UP*UP*U)-3'HC-J4 RNA polymerase complexed with short RNA template strandX-RAY DIFFRACTION2.92003-03-25

Release history

Release3.463.47
Date2018-11-022018-11-09

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
15Z4J|1|BStructure of Tailor in complex with U4 RNAX-RAY DIFFRACTION1.824
24DR7|1|VCrystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with codon, crystallographically disordered near-cognate transfer RNA anticodon stem-loop mismatched at the second codon position, and streptomycin boundX-RAY DIFFRACTION3.754
33S4G|1|C+3S4G|1|BLow Resolution Structure of STNV complexed with RNAX-RAY DIFFRACTION64
42QQP|1|RCrystal Structure of Authentic Providence VirusX-RAY DIFFRACTION3.84
53IE1|1|GCrystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-RAY DIFFRACTION2.852
61NB7|1|FHC-J4 RNA polymerase complexed with short RNA template strandX-RAY DIFFRACTION2.94
71NB7|1|EHC-J4 RNA polymerase complexed with short RNA template strandX-RAY DIFFRACTION2.94
82ZDE|1|GCrystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-RAY DIFFRACTION2.852
95GMF|1|ECrystal structure of monkey TLR7 in complex with guanosine and polyUX-RAY DIFFRACTION2.54
105GMF|1|FCrystal structure of monkey TLR7 in complex with guanosine and polyUX-RAY DIFFRACTION2.54
115GMF|1|GCrystal structure of monkey TLR7 in complex with guanosine and polyUX-RAY DIFFRACTION2.54
125GMG|1|CCrystal structure of monkey TLR7 in complex with loxoribine and polyUX-RAY DIFFRACTION2.64
135GMF|1|HCrystal structure of monkey TLR7 in complex with guanosine and polyUX-RAY DIFFRACTION2.54
145GMG|1|DCrystal structure of monkey TLR7 in complex with loxoribine and polyUX-RAY DIFFRACTION2.64
153IE1|1|HCrystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-RAY DIFFRACTION2.854
162ZDE|1|HCrystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-RAY DIFFRACTION2.854
172ZDE|1|ECrystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-RAY DIFFRACTION2.854
182ZDE|1|FCrystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-RAY DIFFRACTION2.854
193IE1|1|FCrystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-RAY DIFFRACTION2.854
203IE1|1|ECrystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-RAY DIFFRACTION2.854