#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodÅDate
16FYY|1|1 (rep)Transfer RNAtRNAi, mRNA (31-MER)Saccharomyces cerevisiaeEukaryaRF00005Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C2)Electron microscopy3.022018-12-05
26FYX|1|1Transfer RNAtRNAi, mRNA (31-MER)Saccharomyces cerevisiaeEukaryaRF00005Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C1)Electron microscopy3.52018-12-05
31YFG|1|ATransfer RNAYEAST INITIATOR TRNASaccharomyces cerevisiaeEukaryaRF00005YEAST INITIATOR TRNAX-ray diffraction31997-09-03
45OA3|1|1Transfer RNAinitiator Met-tRNA-iSaccharomyces cerevisiaeEukaryaRF00005Human 40S-eIF2D-re-initiation complexElectron microscopy4.22017-08-09
53J81|1|1Transfer RNAMet-tRNAi, mRNARF00005CryoEM structure of a partial yeast 48S preinitiation complexElectron microscopy42014-11-05
66GSM|1|1Transfer RNAMet-tRNAi, mRNA (5'-R(P*AP*AP*U)-3')Saccharomyces cerevisiaeEukaryaRF00005Structure of a partial yeast 48S preinitiation complex in open conformationElectron microscopy5.152019-07-31
76GSN|1|1Transfer RNAtRNAi (75-MER), mRNASaccharomyces cerevisiaeEukaryaRF00005Structure of a partial yeast 48S preinitiation complex in closed conformationElectron microscopy5.752019-06-26
83JAQ|1|1Transfer RNAMet-tRNAi, mRNASaccharomyces cerevisiaeEukaryaRF00005Structure of a partial yeast 48S preinitiation complex in open conformationElectron microscopy62015-08-12

Release history

Release3.853.863.873.883.893.903.913.923.933.943.953.963.97
Date2019-08-022019-08-092019-08-162019-08-232019-08-282019-09-042019-09-112019-09-192019-09-252019-10-032019-10-092019-10-162019-10-23

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_99632.5NR_all_99632.43.85(7) 6GSN|1|1, 6FYY|1|1, 6FYX|1|1, 5OA3|1|1, 3JAQ|1|1, 3J81|1|1, 1YFG|1|A(1) 6GSM|1|1(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_99632.5NR_all_46777.13.98(1) 1YFG|1|A(7) 5OA3|1|1, 6FYY|1|1, 6GSN|1|1, 3JAQ|1|1, 6FYX|1|1, 6GSM|1|1, 3J81|1|1(0)
NR_all_99632.5NR_all_77184.13.98(1) 5OA3|1|1(7) 6FYY|1|1, 6GSN|1|1, 3J81|1|1, 6FYX|1|1, 6GSM|1|1, 1YFG|1|A, 3JAQ|1|1(0)
NR_all_99632.5NR_all_99632.63.98(6) 6FYX|1|1, 6FYY|1|1, 6GSM|1|1, 3J81|1|1, 6GSN|1|1, 3JAQ|1|1(2) 1YFG|1|A, 5OA3|1|1(0)

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
13J81|1|1CryoEM structure of a partial yeast 48S preinitiation complexELECTRON MICROSCOPY474
26GSN|1|1Structure of a partial yeast 48S preinitiation complex in closed conformationELECTRON MICROSCOPY5.7575
36FYY|1|1Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C2)ELECTRON MICROSCOPY3.0264
46FYX|1|1Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C1)ELECTRON MICROSCOPY3.564
56GSM|1|1Structure of a partial yeast 48S preinitiation complex in open conformationELECTRON MICROSCOPY5.1564
63JAQ|1|1Structure of a partial yeast 48S preinitiation complex in open conformationELECTRON MICROSCOPY664
71YFG|1|AYEAST INITIATOR TRNAX-RAY DIFFRACTION364
85OA3|1|1Human 40S-eIF2D-re-initiation complexELECTRON MICROSCOPY4.275
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