4GPY Summary
- Structure Title
- 4GPY Summary
- Authors
- Kondo, J., Koganei, M., Maianti, J.P., Ly, V.L., Hanessian, S.
- Release Date
- 2013-04-03
- Experimental technique
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
- Chains
-
- 2 RNA chains from unknown source
- 0 other chains
- Compounds
- RNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3'), RNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')
Pairwise Interactions
Interactions annotated by FR3D:- 18 base-pairs
- 43 base-stacking
- 19 base-phosphate
- 0 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 4GPY contains:- 4 internal loops from 0 motif groups
- 1 hairpin loop from 0 motif groups
- 0 three-way junctions
3D Redundancy
4GPY belongs to the following equivalence classes in the current representative set:- NR_20.0_71199.1 (1)
- NR_3.0_71199.1 (1)
- NR_3.5_71199.1 (1)
- NR_4.0_71199.1 (1)
- NR_all_71199.1 (1)