4LFB Summary
- Structure Title
- 4LFB Summary
- Authors
- Demirci, H., Belardinelli, R., Carr, J., Murphy IV, F., Jogl, G., Dahlberg, A.E., Gregory, S.T.
- Release Date
- 2014-07-02
- Experimental technique
- X-RAY DIFFRACTION
- Resolution
- 3.0 Å
- Chains
-
- 1 RNA chain from Thermus thermophilus
- 20 other chains
- Compounds
- 16S rRNA, ribosomal protein S2, ribosomal protein S3, ribosomal protein S4, ribosomal protein S5, ribosomal protein S6, ribosomal protein S7, ribosomal protein S8, ribosomal protein S9, ribosomal protein S10, ribosomal protein S11, ribosomal protein S12, ribosomal protein S13, ribosomal protein S14, ribosomal protein S15, ribosomal protein S16, ribosomal protein S17, ribosomal protein S18, ribosomal protein S19, ribosomal protein S20, ribosomal protein THX
Pairwise Interactions
Interactions annotated by FR3D:- 668 base-pairs
- 1,621 base-stacking
- 705 base-phosphate
- 93 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 4LFB contains:- 64 internal loops from 39 motif groups
- 32 hairpin loops from 15 motif groups
- 13 three-way junctions
3D Redundancy
4LFB has chains which belong to the following equivalence classes in the current representative set:- NR_20.0_65795.74 (1) rep
- NR_3.5_65795.74 (1) rep
- NR_4.0_65795.74 (1) rep
- NR_all_65795.74 (1) rep
Similar structures
4LT8 5CZP 7AZS 4V9Q 4V7L 4V67 6N9F 4V9I 5VPO 4KVB 6N9E 1VVJ 4OX9 5VPO 4L71 6B4V 4LFZ 4LT8 1VVJ 4WQY 4V7L 5F8K 4V97 4V8F 4TUC 4V8G 6XQE 4V9K 4V9K 7AZS 4V97 4V9I 6N9F 6N9E 4LSK 5CZP 5WNR 4V83 4V7Y 4V9L 4V7Y 4V7P 4V7P 4V63 4V8G 4V9L 4V84 4LEL 5D8B 4V9M 5DOX 4V9M 6UCQ 4V5G 4XEJ 4V8J 4XEJ 6B4V 4P70 4V8A 1HNX 6N1D 4P70 4V8A 6N1D 4L71 4LFZ 4V9Q 2UXD 1N33 4V67 6UCQ 4V8J 4V5G 4V83 6ND6 6CAO 6GSK 4V5D 1HNZ 4TUD 4V7K 6GSK 4TUA 4WQU 4V51 4V9A 6CAS 6CAR 1VY7 7JQL 4V7K 7JQL 4V8Q 4TUA 5NDJ 4L47 5V8I 1XMQ 1VY5 4V6F 4V51 4V7M 4L47 4V8C 1HR0 4V5Q 1VY6 1IBM 4WQF 4V8C 4V5K 4TUC 5F8K 4V8E 4V5E 1XNQ 4V90 4V8H 4P6F 4TUB 4V8F 4V9A 2HHH 4LSK 4YY3 4TUB 6XQE 4V8H 4V87 3T1Y 3T1H 4V5E 2UXB 5V8I 4WQY 4P6F 4TUD 4V5C 4WRO 7LH5 4TUE 4V87 4V8E 1IBK 4V5D 4TUE 1N32 7LH5 4V63 6OJ2 6GZQ 6NWY 6NWY 7V2O 7V2P 8FOM 6BUW 6BUW 8FOM 8FON 8FON 6NDK 1I94 6BZ8 6BZ7 6BZ8 7V2Q 6OXI 6OXI 6BZ6 5J30 6OJ2 6OF6 6OXA 5J30 6OF6 6NUO 6OXA 6NUO 7V2L 1FKA 6NSH 5UQ7 6NSH 7V2M 6BZ7 6NDK 2F4V 5LMR 5LMV 5LMS 5IMQ 5LMP 1I97 4V68 1JGQ 4V42 1JGO 5IMR 4V5N 4V5M 1JGP 5A9Z 6GZX 5LMO 6GZX 5ZLU 6Q95 5OT7 7V2N 6O3M 6O3M 5LMN 6OSI 6OSI 6GZZ 6GZZ 1I96 1I95 5LMQ 5LMU 5LMT 5AA0 6BZ6 4LEL 1N36 4V8O 1N34 4V4R 4V4T 4V4S 4V4X 4V4Z 4V4Y 4V4P 4B3M 4B3T 4B3R 6GSJ 6GSJ 4B3S 4V4I 2ZM6 4V5A 4V5K 5DOX 4V84 4V4J 5D8B 4V7W 1XMO 4V7X 4V7X 2E5L 4V7W 4V7Z 4W29 4V7Z 4V5A 4W29 5BR8 1J5E 6BOK 6BOK 6BOH 6BOH 5VPP 5VPP 5J3C 5J3C 6OPE 6OTR 6OTR 6ORD 5UQ8 6ORD 6OPE 6NTA 7DUH 7DUJ 7DUG 4AQY 4V8X 4V6A 4V6A 4V8U 4V8U 4V9N 4V8X 4V8N 4V8N 4V9J 4V9N 4V9J 6GSL 6GSL 7DUK 6NTA 4ZSN 5EL7 4DV0 6MPI 5J4C 5W4K 4DV3 8T8C 7RQC 5EL6 5J4B 6QNR 5DFE 5J8B 4Z8C 6CAP 5HCR 4DV4 6CFK 6OF1 6CFJ 4JI8 6XHX 4WQ1 6XHY 8EV7 6CAE 4DR1 4WQR 7U2J 7RQE 5EL6 4LFA 5IB8 8EKB 4DV5 5IB7 6XHY 7U2H 1VY4 5EL4 5HCR 7U2I 6ND5 8T8C 4V6G 4Z3S 4V5F 8FC4 4JI2 6CFJ 4WT8 8EV6 7RQC 6XHV 6XHW 4K0K 6OF1 6QNR 4WSD 5NDK 4Z8C 5WIS 6CAQ 4V8I 7AZO 5DFE 8EV7 5IB8 2UXC 5NDK 7AZO 6NY6 4WPO 4LNT 8EKB 5WNV 8FC2 8FC5 8FC6 4KHP 4V9H 4DV6 4JI7 5FDV 4X62 7DUL 8FC2 7RQB 5FDV 8FC1 4DV7 5FDU 4DR5 4Y4O 4LF4 4DR6 4LF8 4LF7 4X65 5WNT 4JI1 4X64 4DUY 4DR2 4LF9 4Y4O 4LF6 7RQB 8FC5 8FC6 7DUI 5FDU 5WNU 4WSM 7U2J 4WSM 4WQR 5IB7 8T8B 8FC3 6MPF 5J4B 8FC1 5E81 4X66 7RQ8 5EL7 6CFK 5E81 4WQ1 7U2H 6XHX 8T8B 4DR3 4JYA 5HCQ 4JI3 6CAE 5IBB 4JI6 5WNP 8FC3 5IBB 6CFL 4LFC 5HCQ 4JI0 7RQE 6CFL 4DR4 5WNS 1VY5 4WU1 7JQM 6XQD 7RQA 4WR6 4V7J 6XQD 4YZV 4V9S 6DTI 4WQU 4V7J 4ZER 4V9R 4ZER 4WU1 7RQA 4V9S 4WRA 4V9B 4WR6 8CVJ 1IBL 4V9B 4WRA 5DOY 4DR7 4W2E 6O97 6C5L 6C5L 4V8B 4V95 7RQ9 4WT1 5WIT 4ZSN 4YPB 4V5L 4YZV 4WQF 8CVL 1VY6 4V5C 4V5P 4V5J 3OTO 5NDJ 4WRO 1XNR 4V5S 4V6F 6UO1 1VY7 8CVJ 8CVL 4V9R 5EL5 6ND6 4W2F 6UO1 7RQ9 4WZO 1HNW 4YPB 4V5J 4WZO 4Y4P 4V5Q 4V5P 4V5S 7JQM 7MD7 4V8D 4WPO 4V8D 4DV1 6FKR 8CVK 4V5R 6QNQ 7RQD 6O97 8FC4 4V5F 4Z3S 5E7K 5IWA 6MKN 5EL5 4JI4 4W2G 4LF5 4V6G 5J4C 5EL4 6FKR 4JV5 4NXN 4W2I 7MD7 5HD1 4DUZ 4LNT 7RQ8 5HCP 4W2I 5W4K 6QNQ 6XHV 4WSD 4W4G 4W2H 7U2I 5WIS 4GKJ 7RQD 4V8B 4Y4P 5WIT 4JI5 4W4G 4W2F 5DOY 1FJG 8CVK 5WNQ 4V8I 4V7M 4WT1 5HCP 5HAU 4NXM 4DV2 4W2G 4GKK 5E7K 4V5R 4WT8 6XHW 5HAU 5HD1 4W2H 6ND5 8EV6 4V95 1VY4Structures from NR_all_65795.74