4PDQ Summary
- Structure Title
- 4PDQ Summary
- Authors
- Release Date
- 2015-01-07
- Experimental technique
- X-RAY DIFFRACTION
- Resolution
- 3.0 Å
- Chains
-
- 2 RNA chains from synthetic construct
- 0 other chains
- Compounds
- RNA (5'-*UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C-3'), RNA (5'-*UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C-3')
Pairwise Interactions
Interactions annotated by FR3D:- 16 base-pairs
- 50 base-stacking
- 21 base-phosphate
- 1 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 4PDQ contains:- 4 internal loops from 0 motif groups
- 0 hairpin loops from 0 motif groups
- 0 three-way junctions
3D Redundancy
4PDQ belongs to the following equivalence classes in the current representative set:- NR_20.0_97151.3 (1)
- NR_3.0_97151.3 (1)
- NR_3.5_97151.3 (1)
- NR_4.0_97151.3 (1)
- NR_all_97151.3 (1)