- Structure title
- Structure of a mammalian 80S ribosome obtained by docking homology models of the RNA and proteins into an 8.7 A cryo-EM map
- Authors
- Release date
- 2014-07-09
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 8.7 Å
- Chains
-
36 RNA chains from
Canis lupus
-
50 other chains
- Nucleic acid compounds
18S Ribosomal RNA, RNA Expansion segment ES3, RNA Expansion segment ES4, RNA Expansion segment ES6 part I, RNA Expansion segment ES6 part II, RNA Expansion segment ES9, RNA helix, RNA helix, 28S Ribosomal RNA, 5.8S Ribosomal RNA, RNA Expansion segment ES3, RNA Expansion segment ES4, RNA Expansion segment ES5, RNA Expansion segment ES7 part I, RNA Expansion segment ES7 part II, RNA Expansion segment ES7 part III, RNA Expansion segment ES9, RNA Expansion segment ES12, RNA Expansion segment ES15 part I, RNA Expansion segment ES15 part II, RNA Expansion segment ES19, RNA Expansion segment ES20, RNA Expansion segment ES24, RNA Expansion segment ES27, RNA Expansion segment ES30, RNA Expansion segment ES31 part I, RNA Expansion segment ES31 part II, RNA Expansion segment ES39 part I, RNA Expansion segment ES39 part II, RNA Expansion segment ES39 part III, RNA Expansion segment ES41, RNA Expansion segment ES9 part2, RNA Expansion segment ES10, RNA helices, 5S Ribosomal RNA, E site t-RNA
- Other compounds
40S Ribosomal protein RACK1, 40S Ribosomal protein SA, 40S Ribosomal protein S3e, 40S Ribosomal protein S9e, 40S Ribosomal protein S2e, 40S Ribosomal protein S5e, 40S Ribosomal protein S15ae, 40S Ribosomal protein S16e, 40S Ribosomal protein S20e, 40S Ribosomal protein S14e, 40S Ribosomal protein S23e, 40S Ribosomal protein S18e, 40S Ribosomal protein S29e, 40S Ribosomal protein S13e, 40S Ribosomal protein S11e, 40S Ribosomal protein S15e, 60S Ribosomal protein L37e, 60S Ribosomal protein L39e, 60S Ribosomal protein L44e, 60S Ribosomal protein L10a, 60S Ribosomal protein L30e, 60S Ribosomal protein L19, 60S Ribosomal protein L35, 60S Ribosomal protein L32, 60S Ribosomal protein L8, 60S Ribosomal protein L3, 60S Ribosomal protein L4, 60S Ribosomal protein L11, 60S Ribosomal protein L9, 60S Ribosomal protein L7a, 60S acidic ribosomal protein P0, 60S Ribosomal protein L10, 60S Ribosomal protein L12, 60S ribosomal protein L13a, 60S Ribosomal protein L23, 60S Ribosomal protein L27a, 60S Ribosomal protein L15e, 60S Ribosomal protein L5, 60S Ribosomal protein L18, 60S Ribosomal protein L19, 60S Ribosomal protein L21, 60S Ribosomal protein L17, 60S Ribosomal protein L23a, 60S Ribosomal protein L26, 60S Ribosomal protein L24, 60S Ribosomal protein L35, 60S Ribosomal protein L7, 60S Ribosomal protein L31, 60S Ribosomal protein L32, 60S Ribosomal protein L37a
Pairwise Interactions
Interactions annotated by
FR3D:
View all
RNA 3D Motifs
In the current release of the
RNA 3D Motif Atlas, 4V5Z contains:
-
0 hairpin loops from 0 motif groups
-
0 internal loops from 0 motif groups
-
0 junction loops from 0 motif groups
More
3D Redundancy
4V5Z has chains which belong to the following equivalence classes in the current representative set:
Similar structures
None found
