View in PDB or NAKB
Structure Title
5GMK Summary
Authors
Release Date
2016-08-17
Experimental technique
ELECTRON MICROSCOPY
Resolution
3.4 Å
Chains
  • 6 RNA chains from Saccharomyces cerevisiae
  • 39 other chains
Compounds
Pre-mRNA-splicing factor 8, 5'-Exon, Pre-mRNA-splicing factor SNU114, U5 snRNA, U6 snRNA, Protein CWC16, Pre-mRNA-splicing factor CWC25, Pre-mRNA-splicing factor ISY1, Pre-mRNA-splicing factor SYF2, Pre-mRNA-splicing factor CWC21, U2 snRNA, Intron_BPS, 5'-Splicing Site, Pre-mRNA-splicing factor PRP46, Pre-mRNA-processing protein 45, Pre-mRNA-splicing factor SLT11, Pre-mRNA-splicing factor CWC2, Pre-mRNA-splicing factor CWC15, Pre-mRNA-splicing factor BUD31, Pre-mRNA-splicing factor CWC22, U2 small nuclear ribonucleoprotein B'', U2 small nuclear ribonucleoprotein A', Pre-mRNA-splicing factor CEF1, Pre-mRNA-splicing factor CLF1, Small nuclear ribonucleoprotein Sm D2, Small nuclear ribonucleoprotein Sm D2, Small nuclear ribonucleoprotein F, Small nuclear ribonucleoprotein E, Small nuclear ribonucleoprotein G, Small nuclear ribonucleoprotein-associated protein B, Small nuclear ribonucleoprotein Sm D3, Small nuclear ribonucleoprotein Sm D1, Pre-mRNA-processing factor 17, Pre-mRNA-processing factor 19, Pre-mRNA-processing factor 19, Pre-mRNA-processing factor 19, Pre-mRNA-processing factor 19, Small nuclear ribonucleoprotein-associated protein B, Pre-mRNA-splicing factor SNT309, Small nuclear ribonucleoprotein E, Pre-mRNA-splicing factor SYF1, Small nuclear ribonucleoprotein F, Small nuclear ribonucleoprotein G, Small nuclear ribonucleoprotein Sm D3, Small nuclear ribonucleoprotein Sm D1

Pairwise Interactions

Interactions annotated by FR3D: View all

RNA 3D Motifs

In the current release of the RNA 3D Motif Atlas, 5GMK contains:
  • 11 internal loops from 0 motif groups
  • 6 hairpin loops from 0 motif groups
  • 1 three-way junction
More

3D Redundancy

5GMK has chains which belong to the following equivalence classes in the current representative set:

Similar structures

None found
Copyright 2024 BGSU RNA group. Page generated in 0.0939 s