View in PDB or NAKB
Structure Title
5MQF Summary
Authors
Release Date
2017-03-22
Experimental technique
ELECTRON MICROSCOPY
Resolution
5.9 Å
Chains
  • 5 RNA chains from Homo sapiens
  • 41 other chains
Compounds
Human gene for small nuclear RNA U2 (snRNA U2), Homo sapiens U5 A small nuclear RNA, Homo sapiens RNA, U6 small nuclear 1 (RNU6-1), small nuclear RNA, Pre-mRNA-processing-splicing factor 8, 116 kDa U5 small nuclear ribonucleoprotein component, SNW domain-containing protein 1, Pleiotropic regulator 1, Pre-mRNA-processing factor 17, U5 small nuclear ribonucleoprotein 40 kDa protein, Pre-mRNA-processing factor 19, Pre-mRNA-processing factor 19, Pre-mRNA-processing factor 19, Pre-mRNA-processing factor 19, Pre-mRNA-splicing factor SPF27, Cell division cycle 5-like protein, Pre-mRNA-splicing factor SYF1, Pre-mRNA-splicing factor SYF2, Crooked neck-like protein 1, Pre-mRNA-splicing factor RBM22, Protein BUD31 homolog, Spliceosome-associated protein CWC15 homolog, Serine/arginine repetitive matrix protein 2, Pre-mRNA-splicing factor CWC22 homolog, Intron-binding protein aquarius, Peptidyl-prolyl cis-trans isomerase-like 1, U2 small nuclear ribonucleoprotein A', U2 small nuclear ribonucleoprotein B'', MINX pre-mRNA (intron), MINX pre-mRNA (intron), Small nuclear ribonucleoprotein Sm D2, Small nuclear ribonucleoprotein F, Small nuclear ribonucleoprotein E, Small nuclear ribonucleoprotein G, Small nuclear ribonucleoprotein Sm D3, Small nuclear ribonucleoprotein-associated proteins B and B', Small nuclear ribonucleoprotein Sm D1, Small nuclear ribonucleoprotein Sm D2, Small nuclear ribonucleoprotein F, Small nuclear ribonucleoprotein E, Small nuclear ribonucleoprotein G, Small nuclear ribonucleoprotein Sm D3, Small nuclear ribonucleoprotein-associated proteins B and B', Small nuclear ribonucleoprotein Sm D1, Peptidyl-prolyl cis-trans isomerase E, Eukaryotic initiation factor 4A-III, ATP-dependent RNA helicase DHX8

Pairwise Interactions

Interactions annotated by FR3D: View all

RNA 3D Motifs

In the current release of the RNA 3D Motif Atlas, 5MQF contains:
  • 9 internal loops from 0 motif groups
  • 6 hairpin loops from 0 motif groups
  • 0 three-way junctions
More

3D Redundancy

5MQF has chains which belong to the following equivalence classes in the current representative set:

Similar structures

None found
Copyright 2024 BGSU RNA group. Page generated in 0.1316 s