6MTD Summary
- Structure Title
- 6MTD Summary
- Authors
- Release Date
- 2018-11-21
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
- Chains
-
- 4 RNA chains from Oryctolagus cuniculus
- 80 other chains
- Compounds
- 28S rRNA, 5S rRNA, 5.8S rRNA, 18S rRNA, uL2, uS2, uL3, eS1, uL4, uS5, uL18, uS3, eL6, eS4, uL30, uS7, eL8, eS6, uL6, eS7, uL16, eS8, uL5, uS4, eS10, eL13, uS17, eL14, eS12, eL15, uS15, uL13, uS11, uL22, uS19, eL18, uS9, eL19, eS17, eL20, uS13, eL21, eS19, eL22, uS10, uL14, eS21, eL24, uS8, uL23, uS12, uL24, eS24, eL27, eS25, uL15, eS26, eL29, eS27, eL30, eS28, eL31, uS14, eL32, eS30, eL33, eS31, eL34, RACK1, uL29, eL36, eL37, eL38, eL39, eL40, eL41, eL42, eL43, el28, uL10, eL11, uL1, eEF2, SERBP1
Pairwise Interactions
Interactions annotated by FR3D:- 2,108 base-pairs
- 5,490 base-stacking
- 2,209 base-phosphate
- 261 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 6MTD contains:- 269 internal loops from 0 motif groups
- 114 hairpin loops from 0 motif groups
- 32 three-way junctions
3D Redundancy
6MTD has chains which belong to the following equivalence classes in the current representative set:- NR_20.0_06650.33 (1)
- NR_20.0_21280.29 (1)
- NR_20.0_10255.33 (1)
- NR_3.5_06650.33 (1)
- NR_3.5_21280.29 (1)
- NR_3.5_10255.33 (1)
- NR_4.0_06650.33 (1)
- NR_4.0_21280.29 (1)
- NR_4.0_10255.33 (1)
- NR_all_06650.33 (1)
- NR_all_21280.29 (1)
- NR_all_10255.33 (1)
Similar structures
7O7Y 6R7Q 6FRK 7TUT 5LZU 6HCJ 6R6G 7NWG 6MTB 5LZT 6GZ4 5LZX 6GZ3 5LZW 5LZZ 6GZ5 6MTC 6MTE 6HCF 5LZY 4UJC 4D5Y 4D67 4UJD 3JAJ 3JAN 6FTG 4UJE 6HCM 6HCQ 6FTJ 3J92 3JAI 3JAG 6FTI 7NWH 3JAH 6D90 7QWS 8BTK 7NWI 7O81 7TOQ 7QWR 7TOR 7UCK 7QWQ 6SGC 8B5L 7OBR 8P2K 7O80 8BPO 8B6C 7ZJW 7OYD 7ZJX 8BHF 6R5Q 5LZV 7A01 5LZS 6T59 7TM3 6D9J 7NFX 7UCJ 6P5N 7MDZ 6ZVK 6P5K 6P5J 6R6P 6P5I 7O7ZStructures from NR_all_06650.33