View in PDB or NAKB
Structure Title
6VU3 Summary
Release Date
Experimental technique
3.7 Å
  • 6 RNA chains from synthetic construct, Escherichia coli
  • 60 other chains
50S ribosomal protein L21, 50S ribosomal protein L22, 50S ribosomal protein L23, 50S ribosomal protein L24, 50S ribosomal protein L25, NT DNA, T DNA, mRNA with 12 nt long spacer, 50S ribosomal protein L10, E-site and A-site tRNA (fMet), DNA-directed RNA polymerase subunit beta, Transcription termination/antitermination protein NusG, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta', E-site and A-site tRNA (fMet), 30S ribosomal protein S18, 16S rRNA, 30S ribosomal protein S20, 30S ribosomal protein S21, 30S ribosomal protein S2, 30S ribosomal protein S1, 30S ribosomal protein S3, 30S ribosomal protein S4, 30S ribosomal protein S5, 30S ribosomal protein S6, 30S ribosomal protein S7, 30S ribosomal protein S8, 30S ribosomal protein S9, 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, 30S ribosomal protein S14, 30S ribosomal protein S15, 30S ribosomal protein S16, 30S ribosomal protein S17, 30S ribosomal protein S19, 30S ribosomal protein S13, 50S ribosomal protein L11, 50S ribosomal protein L7/L12, 23S rRNA, 50S ribosomal protein L27, 50S ribosomal protein L28, 5S rRNA, 50S ribosomal protein L29, 50S ribosomal protein L30, 50S ribosomal protein L31, 50S ribosomal protein L2, 50S ribosomal protein L32, 50S ribosomal protein L3, 50S ribosomal protein L33, 50S ribosomal protein L4, 50S ribosomal protein L34, 50S ribosomal protein L5, 50S ribosomal protein L35, 50S ribosomal protein L6, 50S ribosomal protein L36, 50S ribosomal protein L9, 50S ribosomal protein L13, 50S ribosomal protein L14, 50S ribosomal protein L15, 50S ribosomal protein L16, 50S ribosomal protein L17, 50S ribosomal protein L18, 50S ribosomal protein L19, 50S ribosomal protein L20

Pairwise Interactions

Interactions annotated by FR3D: View all

RNA 3D Motifs

In the current release of the RNA 3D Motif Atlas, 6VU3 contains:
  • 185 internal loops from 0 motif groups
  • 108 hairpin loops from 0 motif groups
  • 26 three-way junctions

3D Redundancy

6VU3 has chains which belong to the following equivalence classes in the current representative set:

Similar structures

5L4O 7ZHG 6OGI 3JCE 8A3L 6OG7 6WDF 5ZEP 7K50 5LZD 5WE6 5WFK 5UQ7 5U4I 6BU8 7JT2 6BU8 5MDY 5WE6 5WFK 5ZEB 7K52 7K50 7K55 7JT1 7ZAI 5MDZ 6OJ2 6OF6 5J30 5J30 7SSD 8AP4 6OXA 6WDG 6OFX 2FMT 6YEF 6WD1 2FMT 6OXA 7MSH 6VYS 7JSS 6WDL 6WD6 6WDJ 7JSZ 5WF0 5WF0 5LZA 6WD8 6WDL 7JT3 6WD2 5ZEU 6WD4 6WD4 6WD9 6WDJ 6WD8 6WD3 6BUW 6WD5 6WDK 6BUW 6OXI 6OXI 6X7F 6X7F 8A3L 5U4I 6WDK 6WDM 6ZTM 6ZTJ 6WD5 5UYL 6WDM 6WD2 5UYL 6WD3 7K51 8BHN 6X7K 6OPE 5WFS 5WDT 5WFS 5WDT 5J3C 7ZAG 8G61 6OPE 7TOQ 6X7K 6OTR 6OTR 6OTR 5J3C 8CKU 6ORE 7MSZ 5H5U 8B7Y 7UNR 5AFI 8BUU 7MSC 7TOR 7NHN 7M5D 6Y69 7P7R 5AFI 6WDE 8SYL 7UNU 7ST6 6WD0 6WDE 6WD0 6H4N 7ST6 8AM9 6OXA 7SSO 7K53 7SSN 7LV0 5UYM 5U9F 5U9G 5UQ8 5MDW 6BZ6 6OXA 6C4I 6C4I 6WDD 6OF6 6OJ2 6X6T 6X6T 6WDD 7K54 7ST7 7NHL 6ZTO 6ZU1 6ZTP 6BZ6 6ORD 6OTR 5MDV 5WE4 7PJY 5U9F 5UYM 6WNW 7K53 5U9G 7NBU 5WE4 7PJV 6ORD 6VYQ 6XIJ 6VYW 6VZ7 4V69 7PJX 5JB3 5JBH 6SW9 5LMS 6VYU 6XII 6H58 6H58 3J5S 4V7B 6XII 6VZ7 6VYU 6VYW 3J78 3J78 3J77 5U4J 6X9Q 6X9Q 6YTF 6XDR 6XDR 3JBN 3JCN 5LZC 6XGF 7PJT 7PJZ 5LMQ 3JBO 5LMV 8FIZ 5LZB 6XGF 5LZF 4V78 6VYT 6VYT 4V6P 4V6S 4V72 5ZEY 4V6N 4V75 5ME1 4V6O 4V71 4V76 4V77 4V74 4V70 5ME0 4V73 4V79 4V6Z 4V6Y 1EG0 6VYX 6VYY 4V6V 7PJU 6VZ5 6VZ3 6VZ3 6VZ5 6VYZ 6VYY 4V6Q 4V6R 3DEG 4V6T 6VZ2 6VZ2 6VYZ 6VYX 6XIJ 6YS5 6WD7 6YSI 6BZ8 6BZ8 7SSL 7SSW 6WDA 6GWT 5UYQ 6ORL 6VYR 6GXN 5UYP 5UYK 5KPS 5KPW 6BZ7 6NDK 6VYR 6GXM 5UYQ 7JSW 6DNC 6DNC 6WD9 6XDQ 6VYQ 6VYS 6WD6 6OSQ 6WDA 6Q95 6BZ7 3JCJ 5L3P 7ZKI 6SWC 6OSK 6XDQ 5LMU 6ZTL 6VZJ 6VZJ 5KPX 6BZ8 5KPV 7PJW 6BZ7 6WDC 6O7K 6OST 5KPV 6WDH 6WDH 6OT3 6OGG 6ZTN 6WDC 6BZ8 6OUO 5KPW 6OGF 5KPS 6WD7 5KPX 6NDK 6GXO 7SS9 5UYP 3J9Y 5UYN 6WDB 6BZ7 5IQR 6O9K 6WDI 6WDB 6WDI 5UYN 5UYK 7ST2 4YPB 4W2F 1VY4 4Z3S 1VY7 7RQ9 5E7K 8CVL 8CVJ 1VY5 4YZV 7JQM 4ZSN 8CVL 7U2I 7JQL 4V8Q 4V51 4WPO 6ND5 4V9S 4W2I 3CW5 4WR6 8CVJ 6O97 4WR6 4W2G 4Y4P 4V9S 5EL4 5HCP 5HD1 8EV6 6QNQ 5EL5 4W4G 5WIT 4ZER 5DOY 5IB8 4P6F 4V8F 5WIT 4WRO 5DOY 4WQY 8EV6 1VY6 4ZSN 5F8K 4V5C 4V8B 4YPB 1VY5 6ND6 4TUC 4WZO 7OSM 4V87 6UO1 6UO1 4ZER 5WIS 4W2F 4V9R 5EL4 7RQ9 4WZO 4V9R 4W4G 4WRO 4V8E 4Z3S 1VY6 7JQM 4Y4P 6O97 4V5C 6ND6 4V51 7JQL 6XHV 5DFE 4Z8C 5J4B 6XHY 5IBB 4V8D 8EV7 4WSD 5EL7 4WSD 6CAE 4V6G 6OF1 1VY4 5W4K 4WPO 5J4C 4WQR 4WT1 6XHY 4WQ1 7U2J 5HCQ 4WQR 7U2J 6CAE 8EKB 5IBB 4WQ1 4V6G 8EKB 4V5F 5J4B 4Z8C 5HCR 7RQ8 4V8D 5IB7 7U2H 7OSA 5HCQ 6XQD 4YZV 8EV7 5W4K 4V7M 4W2H 4LNT 6ND5 6XQD 8CVK 7U2H 5E7K 5HAU 5EL6 4WRA 6XHW 4WRA 5DFE 4V5F 4W2G 5IB8 4WT1 5HCP 4LNT 5HD1 5EL7 5HCR 7RQ8 4W2H 6XHW 6OF1 8CVK 5EL6 5IB7 5WIS 6XHV 4W2I 7U2I 5J4C 5HAU 6QNQ 4LT8 6XZ7 8B0X 6BOH 6BOH 6BOH 6BOH 6GSL 6GSL 4V6A 8FTO 8CCS 8EMM 8EMM 8BIL 8G6W 8CEH 8CDR 7K00 8AYE 4V6A 6GSJ 6GSJ 5D8B 4V8O 4V6G 4V8J 5D8B 4V63 4V67 4V8B 4V8J 4V67 4V4X 4V8Q 4V4Z 4YPB 4YPB 3V11 4V5K 4V5K 4V63 7TOR 7MSM 6XZA 7MT2 8G5Z 8CDL 8CF5 7MT7 7MT7 7MT3 8CVM 8CRX 7ZAH 8BGH 8BHJ 6AZ1 7NWT 8EKC 7UNV 7UNW 7TOO 7KGB 8BHL 8BF7 8EIU 8EIU 8CGN 8CGN 8BGE 8BIM 7TOP 8G6X 7UG7 8BH4 6XZB 8CG8 7SA4 7SA4 8BHP 8CIV 8G6Y 4V87 1VY7 4V8C 4P70 6N9E 4P6F 4LT8 4TUD 4V7L 4TUB 6N9F 4V5K 4WQY 6QNQ 1VVJ 4TUD 4P70 4V67 4V7P 5F8K 4V8B 4V7P 6N9E 4TUA 4V5F 4V8E 4V5F 4V7M 5EL5 4TUC 4V8C 6XQE 7LH5 4V7L 4TUB 6XQE 4V67 6GSK 4TUA 7LH5 4V9I 4V87 4W4G 4V5K 6B4V 5D8B 6B4V 4L71 4WZO 4V8C 4V6G 6B4V 4LEL 4W4G 7CHD 6QNQ 7CHD 4V87 4V8B 4V97 4V8C 4LEL 4V97 6B4V 4V63 4V6G 4LSK 4V8F 4V9I 5CZP 6GSK 5CZP 4LFZ 4LSK 5D8B 6QNQ 4L71 3QSY 3CW6 4LFZ 1VVJ 4V63 6N9F
Structures from NR_all_35542.119
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