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Structure Title
6WD0 Summary
Authors
Release Date
2020-07-01
Experimental technique
ELECTRON MICROSCOPY
Resolution
3.0 Å
Chains
  • 6 RNA chains from Escherichia coli
  • 51 other chains
Compounds
23S ribosomal RNA, 5S ribosomal RNA, 16S ribosomal RNA, mRNA, tRNAfMet, tRNAfMet, 50S ribosomal protein L32, 50S ribosomal protein L33, 50S ribosomal protein L34, 50S ribosomal protein L35, 50S ribosomal protein L36, 30S ribosomal protein S2, 30S ribosomal protein S3, 30S ribosomal protein S4, 30S ribosomal protein S5, 30S ribosomal protein S6, 30S ribosomal protein S7, 30S ribosomal protein S8, 30S ribosomal protein S9, 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, 30S ribosomal protein S13, 30S ribosomal protein S14, 30S ribosomal protein S15, 30S ribosomal protein S16, 30S ribosomal protein S17, 30S ribosomal protein S18, 30S ribosomal protein S19, 30S ribosomal protein S20, 30S ribosomal protein S21, 50S ribosomal protein L1, 50S ribosomal protein L2, 50S ribosomal protein L3, 50S ribosomal protein L4, 50S ribosomal protein L5, 50S ribosomal protein L6, 50S ribosomal protein L9, 50S ribosomal protein L10, 50S ribosomal protein L11, 50S ribosomal protein L13, 50S ribosomal protein L14, 50S ribosomal protein L15, 50S ribosomal protein L16, 50S ribosomal protein L17, 50S ribosomal protein L18, 50S ribosomal protein L19, 50S ribosomal protein L20, 50S ribosomal protein L21, 50S ribosomal protein L22, 50S ribosomal protein L23, 50S ribosomal protein L24, 50S ribosomal protein L25, 50S ribosomal protein L27, 50S ribosomal protein L28, 50S ribosomal protein L29, 50S ribosomal protein L30

Pairwise Interactions

Interactions annotated by FR3D: View all

RNA 3D Motifs

In the current release of the RNA 3D Motif Atlas, 6WD0 contains:
  • 177 internal loops from 0 motif groups
  • 107 hairpin loops from 0 motif groups
  • 26 three-way junctions
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3D Redundancy

6WD0 has chains which belong to the following equivalence classes in the current representative set:

Similar structures

5J7L 5J8A 5JC9 4YBB 5IT8 4WOI 4WOI 6I7V 5J91 4V9P 5J88 4V9P 4V9P 4V9P 6LKQ 4V9D 4V9O 4V9O 4WWW 4V9O 4V6C 5J7L 4V7T 4U27 4WF1 5J8A 5JC9 4V7U 4V7V 4V52 4U24 4U25 4V9D 4U26 4V7S 4V57 4V52 4V57 4V9O 4U1U 4V85 4V54 4V64 4V50 4V54 4V64 6BY1 4V53 4V50 4YBB 4U1V 5J88 4V53 4V9C 4V56 4U20 4V56 6I7V 6BY1 4U27 4V55 4V4Q 4V55 4V4Q 4V6D 4U25 4U1U 4V9C 4U1V 4V89 5IT8 4V6E 4WF1 4U24 4U26 4U20 4V6C 4V5Y 5J91 4WWW 4V7T 4V5Y 4V6D 4V7V 4V7S 4V7U 4V6E 4V5B 4V5B 5J5B 4V4H 4V4H 5J5B 6HRM 8B0X 8CGK 8CGV 8CEU 8FTO 8E30 8CAM 8AYE 8E3O 7K00 8CGD 8E49 8QOA 8G6W 7QQ3 8BIM 8E43 7ZP8 8BIL 8G6Y 8E41 8EMM 6XZ7 8QBT 8ANA 8BGE 7LVK 7Z20 6PJ6 8E35 8E48 7N1P 8E33 8BHL 7PJS 8E3M 7S1H 8E47 8E45 8EIU 8E42 8E46 8E32 8E3L 8RQ2 8RQ0 8RPZ 7S1K 7O1A 8AKN 8BF7 8G6X 8HSP 7S1J 7Y7G 7S1I 7S1G 8E36 8BHP 7BL4 7YLA 7N2U 9FBV 8HTZ 7N2V 7ZOD 7Y7E 7SA4 8IFB 7Y7F 6YS3 7UG7 6YSS 6PCR 6PC6 6PC7 7Y7C 7Y7H 8E44 7NWT 7N30 6XZB 7ZQ5 7N31 7O1C 7ZTA 6TBV 6TC3 7Y7D 8RPY 8BH4 7ZQ6 6PCQ 7N2C 8EKC 8P16 8P18 8P17 6XZA 7M5D 8G7R 7UPH 6QDW 8HU1 6PC5 7NSO 7ST2 7OT5 7OTC 8FZH 8G7P 7B5K 8BHJ 6WYV 8AM9 6PCT 6U48 8J1Z 6Y69 8SYL 6PCS 7O19 7ST6 7TOS 5AFI 6WNT 8BGH 5NWY 7OII 7OIF 6WDE 8B7Y 8FZE 8FZJ 8BHN 5H5U 7OIZ 7P3K 8IFC 7NWW 6ORE 7Q4K 6PC8 5MDV 8G2U 6H4N 7AC7 7NSQ 6WNW 6ZU1 6ZTO 6ZTP 6PCH 8PKL 6OM6 8URY 6X7K 6YSR 7PJY 7PJV 8FZI 8FZG 8G7S 8FZD 8G7Q 7NBU 8AP4 5MDW 6SZS 5MGP 7K54 7K53 7SSN 7LV0 7SSO 7ST7 8G34 8G38 5MDZ 6S0K 5U9G 5U9F 6WDD 5UYM 7OIG 7ACJ 6ENU 8UQL 6X6T 6YST 8FZF 7ABZ 6QUL 6VWL 5WFS 7BL5 8R3V 7K55 7JT1 7SSD 6WDG 8G31 6WDF 6WD1 6OG7 5WE4 6OFX 8PEG 3JBV 7CPJ 6C4I 5WDT 7QGN 7BV8 6ENF 7K50 7K52 6WNV 6OGI 8UR0 5GAE 8A3L 3JCE 7ACR 5MDY 5LZD 7D6Z 6ZTM 5WE6 6I0Y 7NSP 7JT2 7K51 8RCL 6X7F 6BU8 5WFK 5O2R 5LZE 8C8Y 6ZTJ 5U4I 6VWN 6VWM 5UYL 6WD2 6WDK 6WD5 6WDM 6WD3 7OJ0 8RCM 5IQR 6OSQ 3JBU 5LZA 5KCR 5JU8 5JTE 7JT3 7JSZ 7JSS 6WDJ 6WD4 6WD8 6WD6 7BL3 6WD9 6WDL 6XDQ 6VYS 6VYQ 6VU3 6YSU 6ORL 8PHJ 6OSK 3J9Z 6DNC 3JCJ 5WF0 7ODE 7JSW 7SSL 7SSW 5UYQ 6WDA 8UQP 6VYR 6ENJ 6Q9A 5L3P 5GAD 6GC8 5UYP 7SS9 5UYK 6OGF 6WD7 6ZTL 8VSA 7BL2 6GWT 6OUO 5KPW 6GXM 5GAG 5GAH 6GBZ 7QG8 5KPS 5UYN 6WDI 6WDB 6GC0 3J9Y 7PJW 6GXO 8C8Z 6GXN 6O9K 6O9J 5KPX 3JCD 4UY8 7D80 5KCS 6VZJ 8VS9 6OT3 6Q97 8FIZ 6ZTN 8C90 6OGG 6WDC 7BL6 3J7Z 5NP6 6WDH 5KPV 8CGJ 8C8X 5GAF 8CGU 8RCS 7QGH 6GXP 6Q98 3JA1 3JCN 8CEP 6OST 8PVA 6GC4 8CGR 5LZF 6XDR 6X9Q 5LZC 5NCO 8C92 6XGF 6GC6 8C91 8C94 6C4H 6GC7 8C99 8UPR 8UQM 8URI 8RCT 5LZB 8C93 8UPO 8C98 7QGR 8URH 4CSU 8C97 8R3V 4V5H 8C96 7PJZ 7PJT 8RCL 8RCM 5U4J 3J8G 7PJX 8URX 8C95 4V69 5AKA 6VZ7 6VYU 6VYW 6XII 8RCS 4V6M 4V7B 5ADY 8C9A 3J5L 4V7C 4V7D 8RCT 6H58 6H58 6XIJ 5ZZM 4V6K 8C9B 6VZ5 6VZ3 4V7A 4V65 4V66 8C9C 4V6T 7PJU 2J28 2RDO 4V6V 6VYZ 6VYY 6VYX 6VZ2 3DG2 3DG0 4V6R 4V6Q 4V7I 4V48 4V75 4V6Z 4V6Y 3BBX 4V6N 4V47 4V72 4V6S 4V6L 3DG4 4V6P 6VYT 4V6O 4V73 4V79 3DG5 4V4W 4V4V 4V76 4V70 4V74 4V77 4V78 4V71
Structures from NR_all_83717.138
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