- Structure Title
- 7D4I Summary
- Authors
- Du, Y., Zhang, J., An, W., Ye, K.
- Release Date
- 2021-10-06
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 4.0 Å
- Chains
-
-
3 RNA chains from
Saccharomyces cerevisiae S288C
- 79 other chains
- Compounds
U3 snoRNA, rRNA 2'-O-methyltransferase fibrillarin, rRNA 2'-O-methyltransferase fibrillarin, Nucleolar protein 56, Nucleolar protein 58, Ribosomal RNA-processing protein 9, 13 kDa ribonucleoprotein-associated protein, 13 kDa ribonucleoprotein-associated protein, 5' ETS, Bud site selection protein 21, U3 small nucleolar RNA-associated protein 7, U3 small nucleolar RNA-associated protein 11, U3 small nucleolar RNA-associated protein MPP10, U3 small nucleolar ribonucleoprotein protein IMP3, U3 small nucleolar ribonucleoprotein protein IMP4, Something about silencing protein 10, Protein SOF1, rRNA-processing protein FCF2, rRNA-processing protein FCF1, U3 small nucleolar RNA-associated protein 4, U3 small nucleolar RNA-associated protein 5, U3 small nucleolar RNA-associated protein 8, U3 small nucleolar RNA-associated protein 9, U3 small nucleolar RNA-associated protein 10, U3 small nucleolar RNA-associated protein 15, NET1-associated nuclear protein 1, Periodic tryptophan protein 2, U3 small nucleolar RNA-associated protein 12, U3 small nucleolar RNA-associated protein 13, U3 small nucleolar RNA-associated protein 6, U3 small nucleolar RNA-associated protein 18, U3 small nucleolar RNA-associated protein 21, Exosome complex component CSL4, Exosome complex component MTR3, ATP-dependent RNA helicase DOB1, M-phase phosphoprotein 6 homolog, Exosome complex component RRP40, Exosome complex component SKI6, Exosome complex component RRP42, Exosome complex component RRP43, Exosome complex exonuclease DIS3, Exosome complex component RRP45, Exosome complex component RRP46, Exosome complex protein LRP1, rRNA biogenesis protein RRP5, U3 small nucleolar RNA-associated protein 22, Ribosomal RNA-processing protein 7, Ribosomal RNA small subunit methyltransferase NEP1, Ribosomal RNA small subunit methyltransferase NEP1, Ribosome biogenesis protein BMS1, RNA 3'-terminal phosphate cyclase-like protein, Nucleolar complex protein 14, Nucleolar complex protein 4, U3 small nucleolar RNA-associated protein 20, U3 small nucleolar RNA-associated protein 14, Essential nuclear protein 1, Pno1, Regulator of rDNA transcription protein 14, Probable ATP-dependent RNA helicase DHR1, 18S rRNA, 40S ribosomal protein S1-A, 40S ribosomal protein S4-A, 40S ribosomal protein S5, 40S ribosomal protein S6-A, 40S ribosomal protein S7-A, 40S ribosomal protein S8-A, 40S ribosomal protein S9-A, 40S ribosomal protein S11-A, 40S ribosomal protein S13, 40S ribosomal protein S14-A, 40S ribosomal protein S16-A, 40S ribosomal protein S18-A, 40S ribosomal protein S19-A, 40S ribosomal protein S22-B, 40S ribosomal protein S23-A, 40S ribosomal protein S24-A, 40S ribosomal protein S27-A, 40S ribosomal protein S28-A, Unassigned peptides 1, Unassigned peptides 2, Exosome complex component RRP4, Exosome complex exonuclease RRP6
Pairwise Interactions
Interactions annotated by
FR3D:
View all
RNA 3D Motifs
In the current release of the
RNA 3D Motif Atlas, 7D4I contains:
-
65 internal loops from 0 motif groups
-
31 hairpin loops from 0 motif groups
- 8 three-way junctions
More
3D Redundancy
7D4I has chains which belong to the following equivalence classes in the current representative set:
Similar structures
None found
