- Structure title
- Sequence specific (AATT) orientation of Hoechst molecules at a unique minor groove binding site (position2) within a self-assembled 3D DNA lattice (4x5)
- Authors
- Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
- Release date
- 2023-12-20
- Experimental technique
- X-RAY DIFFRACTION
- Resolution
- 3.0 Å
- Chains
-
4 DNA chains
-
-
0 other chains
- Nucleic acid compounds
DNA (5'-D(*GP*AP*GP*CP*AP*GP*AP*CP*CP*TP*GP*AP*CP*GP*AP*CP*AP*AP*TP*TP*A)-3'), DNA (5'-D(P*CP*GP*TP*CP*A)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*TP*TP*GP*T*(HT1))-3'), DNA (5'-D(P*GP*GP*TP*CP*TP*GP*C)-3')
- Other compounds
Pairwise Interactions
Interactions annotated by
FR3D:
View all
RNA 3D Motifs
In the current release of the
RNA 3D Motif Atlas, 8TBD contains:
-
0 hairpin loops from 0 motif groups
-
0 internal loops from 0 motif groups
-
0 junction loops from 0 motif groups
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3D Redundancy
This PDB is not included in any representative set equivalence class. Possibly, this PDB doesn't contain any complete nucleotides.
Similar structures
None found
