- Structure title
- Co-transcriptional histone H3K36 methylation complex containing RNA polymerase II elongation complex, Set2, and the upstream nucleosome. (temp130, type B)
- Authors
- Kujirai, T., Ehara, H., Ito, T., Henmi, M., Sekine, S., Kurumizaka, H.
- Release date
- 2025-12-24
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
- Chains
-
1 RNA chain from
synthetic construct
-
2 DNA chains
-
-
31 other chains
- Nucleic acid compounds
RNA (5'-R(P*GP*UP*CP*CP*UP*UP*UP*UP*GP*UP*GP*CP*GP*GP*CP*CP*UP*CP*G)-3'), DNA (198-MER), DNA (198-MER)
- Other compounds
DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, RNA polymerase II third largest subunit B44, part of central core, RNA polymerase II subunit B32, DNA-directed RNA polymerases I, II, and III subunit RPABC1, RNA polymerase subunit ABC23, common to RNA polymerases I, II, and III, RNA polymerase II subunit, DNA-directed RNA polymerases I, II, and III subunit RPABC3, DNA-directed RNA polymerase subunit, RNA polymerase subunit ABC10-beta, common to RNA polymerases I, II, and III, RNA polymerase II subunit B12.5, RNA polymerase subunit ABC10-alpha, Transcription elongation factor 1 homolog, Transcription elongation factor SPT4, Transcription elongation factor SPT5, Histone H3.3, Histone H4, Histone H2A type 1-B/E, Histone H2B type 1-J, Histone H3.3, Histone H4, Histone H2A type 1-B/E, Histone H2B type 1-J, Transcription elongation factor Spt6, Protein that interacts with Spt6p and copurifies with Spt5p and RNA polymerase II, Component of the Paf1p complex, RNAPII-associated chromatin remodeling Paf1 complex subunit, Histone-lysine N-methyltransferase, H3 lysine-36 specific, Leo1, RNAP II-associated protein, Constituent of Paf1 complex with RNA polymerase II, Paf1p, Hpr1p, Ctr9, Leo1, Rtf1 and Ccr4p
Pairwise Interactions
Interactions annotated by
FR3D:
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RNA 3D Motifs
In the current release of the
RNA 3D Motif Atlas, 9WMV contains:
-
0 hairpin loops from 0 motif groups
-
0 internal loops from 0 motif groups
-
0 junction loops from 0 motif groups
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3D Redundancy
This PDB is not included in any representative set equivalence class. Possibly, this PDB doesn't contain any complete nucleotides.
Similar structures
None found
