HL_10FZ_005

3D structure

PDB id

10FZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S ribosomal subunit from E. coli missing the gene encoding for the 16S rRNA 2'-O-methyltransferase RsmI

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

10FZ|1|A|U|209

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_10FZ_005 not in the Motif Atlas

Geometric match to HL_8B0X_066

Geometric discrepancy: 0.2708

The information below is about HL_8B0X_066

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_61337.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

72

Unit IDs

10FZ|1|A|C|207
10FZ|1|A|U|208
10FZ|1|A|U|209
10FZ|1|A|C|210
10FZ|1|A|G|211
10FZ|1|A|G|212

Current chains

Chain A

16S rRNA

Nearby chains