HL_10FZ_009

3D structure

PDB id

10FZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S ribosomal subunit from E. coli missing the gene encoding for the 16S rRNA 2'-O-methyltransferase RsmI

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

10FZ|1|A|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_10FZ_009 not in the Motif Atlas

Homologous match to HL_6CZR_080

Geometric discrepancy: 0.1983

The information below is about HL_6CZR_080

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.4

Basepair signature

cWW-tSW-F

Number of instances in this motif group

58

Unit IDs

10FZ|1|A|C|342
10FZ|1|A|U|343
10FZ|1|A|A|344
10FZ|1|A|C|345
10FZ|1|A|G|346
10FZ|1|A|G|347

Current chains

Chain A

16S rRNA

Nearby chains