HL_10FZ_027

3D structure

PDB id

10FZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S ribosomal subunit from E. coli missing the gene encoding for the 16S rRNA 2'-O-methyltransferase RsmI

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

UGAUAAA

Length

7 nucleotides

Bulged bases

10FZ|1|A|U|1168

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_10FZ_027 not in the Motif Atlas

Homologous match to HL_6CZR_098

Geometric discrepancy: 0.4822

The information below is about HL_6CZR_098

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

10FZ|1|A|U|1165
10FZ|1|A|G|1166
10FZ|1|A|A|1167
10FZ|1|A|U|1168
10FZ|1|A|A|1169
10FZ|1|A|A|1170
10FZ|1|A|A|1171

Current chains

Chain A

16S rRNA

Nearby chains

Chain B

Small ribosomal subunit protein uS2