HL_10FZ_031

3D structure

PDB id

10FZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S ribosomal subunit from E. coli missing the gene encoding for the 16S rRNA 2'-O-methyltransferase RsmI

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

10FZ|1|A|U|1451

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_10FZ_031 not in the Motif Atlas

Geometric match to HL_6SY6_001

Geometric discrepancy: 0.1979

The information below is about HL_6SY6_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

72

Unit IDs

10FZ|1|A|C|1449
10FZ|1|A|U|1450
10FZ|1|A|U|1451
10FZ|1|A|C|1452
10FZ|1|A|G|1453
10FZ|1|A|G|1454

Current chains

Chain A

16S rRNA

Nearby chains