HL_10QM_025
3D structure
- PDB id
- 10QM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.coli 50S ribosomal subunit bound to compound 48a
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.49 Å
Loop
- Sequence
- (PSU)GCUAACG
- Length
- 8 nucleotides
- Bulged bases
- 10QM|1|I|U|958, 10QM|1|I|C|961
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_10QM_025 not in the Motif Atlas
- Homologous match to HL_7A0S_026
- Geometric discrepancy: 0.1775
- The information below is about HL_7A0S_026
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.6
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 434
Unit IDs
10QM|1|I|PSU|955
10QM|1|I|G|956
10QM|1|I|C|957
10QM|1|I|U|958
10QM|1|I|A|959
10QM|1|I|A|960
10QM|1|I|C|961
10QM|1|I|G|962
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain J
- 5S ribosomal RNA; 5S rRNA
- Chain U
- 50S ribosomal protein L16
Coloring options: