HL_10QM_026
3D structure
- PDB id
- 10QM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.coli 50S ribosomal subunit bound to compound 48a
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.49 Å
Loop
- Sequence
- GAAACAAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_10QM_026 not in the Motif Atlas
- Homologous match to HL_7A0S_027
- Geometric discrepancy: 0.1988
- The information below is about HL_7A0S_027
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_47171.3
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
10QM|1|I|G|978
10QM|1|I|A|979
10QM|1|I|A|980
10QM|1|I|A|981
10QM|1|I|C|982
10QM|1|I|A|983
10QM|1|I|A|984
10QM|1|I|C|985
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain J
- 5S ribosomal RNA; 5S rRNA
- Chain Y
- 50S ribosomal protein L20
- Chain Z
- Ribosomal protein L21
- Chain h
- 50S ribosomal protein L30
Coloring options: