HL_10QM_037

3D structure

PDB id

10QM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli 50S ribosomal subunit bound to compound 48a

Experimental method

ELECTRON MICROSCOPY

Resolution

2.49 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

10QM|1|I|A|1535, 10QM|1|I|C|1536

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_10QM_037 not in the Motif Atlas

Geometric match to HL_7LYF_002

Geometric discrepancy: 0.323

The information below is about HL_7LYF_002

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_61337.6

Basepair signature

cWW-tSW-F

Number of instances in this motif group

67

Unit IDs

10QM|1|I|C|1533
10QM|1|I|U|1534
10QM|1|I|A|1535
10QM|1|I|C|1536
10QM|1|I|G|1537
10QM|1|I|G|1538

Current chains

Chain I

23S ribosomal RNA

Nearby chains