HL_10QM_050

3D structure

PDB id

10QM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli 50S ribosomal subunit bound to compound 48a

Experimental method

ELECTRON MICROSCOPY

Resolution

2.49 Å

Loop

Sequence

CGCCAG

Length

6 nucleotides

Bulged bases

10QM|1|I|C|2146

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_10QM_050 not in the Motif Atlas

Homologous match to HL_3U4M_001

Geometric discrepancy: 0.5833

The information below is about HL_3U4M_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.6

Basepair signature

cWW-tSW-F

Number of instances in this motif group

67

Unit IDs

10QM|1|I|C|2143
10QM|1|I|G|2144
10QM|1|I|C|2145
10QM|1|I|C|2146
10QM|1|I|A|2147
10QM|1|I|G|2148

Current chains

Chain I

23S ribosomal RNA

Nearby chains